RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 CTAGE1Q96RT6 745 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 CEP83Q9Y592 693 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 DYNC1I1O14576 645 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 MCM3P25205 808 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 RMDN2Q96LZ7 410 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 NFE2L3Q9Y4A8 694 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 NR1I2O75469 434 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 SPATA5Q8NB90 893 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 MAP3K5Q99683 1374 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 GJB4Q9NTQ9 266 aa9.86□□□□□ -0.83
SSBP2-201ENST00000320672 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 E7EWF7 191 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 POLD1P28340 1107 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 CCDC127Q96BQ5 260 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 ASIC3Q9UHC3 531 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 EXOC3O60645 756 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 TOM1O60784 492 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 TRPC3Q13507 836 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 SMC1BQ8NDV3 1235 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 MRPL44Q9H9J2 332 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 SEC31BQ9NQW1 1179 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 RASAL2Q9UJF2 1139 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 SCAF8Q9UPN6 1271 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 PRKAB2O43741 272 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 INF2Q27J81 1249 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 MAP7D1Q3KQU3 841 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 DNAJC17Q9NVM6 304 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 ATF5Q9Y2D1 282 aaPredicted RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 OSTNP61366 133 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 PRR16Q569H4 304 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 TMTC2Q8N394 836 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 G3BP2Q9UN86 482 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 PTPN23Q9H3S7 1636 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 ANKRD65E5RJM6 399 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 CRCPO75575 148 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 EPB41P11171 864 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 SLC1A4P43007 532 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 IFI16Q16666 785 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 C6orf163Q5TEZ5 329 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 MIGA2Q7L4E1 593 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 LSM14BQ9BX40 385 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 XPO4Q9C0E2 1151 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 PCIF1Q9H4Z3 704 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 FRMD4BQ9Y2L6 1034 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 F5H423 210 aaPredicted RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 GADL1Q6ZQY3 521 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 FAM204AQ9H8W3 233 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 PICK1Q9NRD5 415 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 GDF11O95390 407 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 KRT83P78385 493 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 SEL1L2Q5TEA6 688 aa9.85□□□□□ -0.83
SSBP2-201ENST00000320672 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 TTF2Q9UNY4 1162 aaKnown RBP9.85□□□□□ -0.83
SSBP2-201ENST00000320672 ABCA10Q8WWZ4 1543 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 TNNI1P19237 187 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 ADCK5Q3MIX3 580 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 CPVLQ9H3G5 476 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 DDX21Q9NR30 783 aaKnown RBP eCLIP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 TPCN1Q9ULQ1 816 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 WDR7Q9Y4E6 1490 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 SYNRGQ9UMZ2 1314 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 DLATP10515 647 aaKnown RBP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 PDE6BP35913 854 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 ITKQ08881 620 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 AFG3L2Q9Y4W6 797 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 ZNF608Q9ULD9 1512 aaPredicted RBP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 IFNB1P01574 187 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 WDR44Q5JSH3 913 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 ARHGAP27Q6ZUM4 889 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 PNMA8AQ86V59 439 aaPredicted RBP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 THOC1Q96FV9 657 aaKnown RBP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 METTL22Q9BUU2 404 aaPredicted RBP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 PPIP5K2O43314 1243 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 ARID4AP29374 1257 aaPredicted RBP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 ARPP19P56211 112 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 DBNDD1Q9H9R9 158 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 FIS1Q9Y3D6 152 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 RTL9Q8NET4 1388 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 CLCN1P35523 988 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 MAGEA1P43355 309 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 SNX1Q13596 522 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 TESK2Q96S53 571 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 NACA2Q9H009 215 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 VPS37BQ9H9H4 285 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 MRC2Q9UBG0 1479 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 IL13P35225 146 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 CEP85LQ5SZL2 805 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 ARHGEF2Q92974 986 aaKnown RBP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 SMCO2A6NFE2 343 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 GNAQP50148 359 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 KCTD1Q719H9 257 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 USP28Q96RU2 1077 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 MMS19Q96T76 1030 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 TMOD4Q9NZQ9 345 aa9.84□□□□□ -0.83
SSBP2-201ENST00000320672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.84□□□□□ -0.83
SSBP2-201ENST00000320672 LMTK3Q96Q04 1460 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 SPDYE16A6NNV3 312 aaPredicted RBP9.83□□□□□ -0.84
SSBP2-201ENST00000320672 SPDYE2Q495Y8 402 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms