RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 DHX16O60231 1041 aaKnown RBP36.68■■■■□ 3.46
NECTIN3-201ENST00000319792 YBX3P16989 372 aaKnown RBP eCLIP36.68■■■■□ 3.46
NECTIN3-201ENST00000319792 CCDC178Q5BJE1 867 aa36.68■■■■□ 3.46
NECTIN3-201ENST00000319792 FKBP1CQ5VVH2 108 aa36.68■■■■□ 3.46
NECTIN3-201ENST00000319792 GMPSP49915 693 aaPredicted RBP36.67■■■■□ 3.46
NECTIN3-201ENST00000319792 METAP2P50579 478 aaKnown RBP eCLIP36.67■■■■□ 3.46
NECTIN3-201ENST00000319792 MYOZ2Q9NPC6 264 aa36.67■■■■□ 3.46
NECTIN3-201ENST00000319792 ZDHHC9Q9Y397 364 aa36.67■■■■□ 3.46
NECTIN3-201ENST00000319792 PLIN4Q96Q06 1357 aa36.66■■■■□ 3.46
NECTIN3-201ENST00000319792 BRD1O95696 1058 aa36.66■■■■□ 3.46
NECTIN3-201ENST00000319792 TCP10Q12799 353 aa36.66■■■■□ 3.46
NECTIN3-201ENST00000319792 SYNE3Q6ZMZ3 975 aa36.66■■■■□ 3.46
NECTIN3-201ENST00000319792 SH3BP5LQ7L8J4 393 aa36.66■■■■□ 3.46
NECTIN3-201ENST00000319792 ANKS1AQ92625 1134 aa36.66■■■■□ 3.46
NECTIN3-201ENST00000319792 GREB1LQ9C091 1923 aaPredicted RBP36.65■■■■□ 3.46
NECTIN3-201ENST00000319792 JAK2O60674 1132 aa36.65■■■■□ 3.46
NECTIN3-201ENST00000319792 HMGN5P82970 282 aaKnown RBP36.65■■■■□ 3.46
NECTIN3-201ENST00000319792 IFIT1BQ5T764 474 aaKnown RBP36.65■■■■□ 3.46
NECTIN3-201ENST00000319792 ZNF654Q8IZM8 581 aa36.65■■■■□ 3.46
NECTIN3-201ENST00000319792 TNPO1Q92973 898 aaKnown RBP36.65■■■■□ 3.46
NECTIN3-201ENST00000319792 TSPY3P0CV98 308 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 TSPY8P0CW00 308 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 PDIA4P13667 645 aaKnown RBP36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 MICU3Q86XE3 530 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 NEDD1Q8NHV4 660 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 IL17RBQ9NRM6 502 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 PI4KBQ9UBF8 816 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 DDTLA6NHG4 134 aaPredicted RBP36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 NMT2O60551 498 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 SYT1P21579 422 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 RCSD1Q6JBY9 416 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 DGKHQ86XP1 1220 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 GJA3Q9Y6H8 435 aa36.64■■■■□ 3.46
NECTIN3-201ENST00000319792 SHTN1A0MZ66 631 aa36.63■■■■□ 3.45
NECTIN3-201ENST00000319792 PTPDC1A2A3K4 754 aa36.63■■■■□ 3.45
NECTIN3-201ENST00000319792 GOLGA8AA7E2F4 631 aa36.63■■■■□ 3.45
NECTIN3-201ENST00000319792 METTL16Q86W50 562 aaKnown RBP36.63■■■■□ 3.45
NECTIN3-201ENST00000319792 RAB11FIP4Q86YS3 637 aa36.63■■■■□ 3.45
NECTIN3-201ENST00000319792 CLRN2A0PK11 232 aa36.62■■■■□ 3.45
NECTIN3-201ENST00000319792 WNT10BO00744 389 aa36.62■■■■□ 3.45
NECTIN3-201ENST00000319792 PDCP20941 246 aa36.62■■■■□ 3.45
NECTIN3-201ENST00000319792 MYL10Q9BUA6 226 aa36.62■■■■□ 3.45
NECTIN3-201ENST00000319792 FAM217BQ9NTX9 383 aaPredicted RBP36.62■■■■□ 3.45
NECTIN3-201ENST00000319792 WDR33Q9C0J8 1336 aaKnown RBP36.61■■■■□ 3.45
NECTIN3-201ENST00000319792 MYO1BO43795 1136 aa36.61■■■■□ 3.45
NECTIN3-201ENST00000319792 DTNBO60941 627 aa36.61■■■■□ 3.45
NECTIN3-201ENST00000319792 SHMT1P34896 483 aa36.61■■■■□ 3.45
NECTIN3-201ENST00000319792 MICALL2Q8IY33 904 aa36.61■■■■□ 3.45
NECTIN3-201ENST00000319792 CNTNAP1P78357 1384 aa36.61■■■■□ 3.45
NECTIN3-201ENST00000319792 STX6O43752 255 aa36.6■■■■□ 3.45
NECTIN3-201ENST00000319792 FOXP4Q8IVH2 680 aaPredicted RBP36.6■■■■□ 3.45
NECTIN3-201ENST00000319792 FAM151AQ8WW52 585 aa36.6■■■■□ 3.45
NECTIN3-201ENST00000319792 DDAH1O94760 285 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 RXRAP19793 462 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 CLEC17AQ6ZS10 378 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 CATIPQ7Z7H3 387 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 GPC2Q8N158 579 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 CNOT7Q9UIV1 285 aaKnown RBP36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 CPLX1O14810 134 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 CDC27P30260 824 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 PPP2R5BQ15173 497 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 FAM83AQ86UY5 434 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 ZSCAN29Q8IWY8 852 aaPredicted RBP36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 DNAJC18Q9H819 358 aa36.59■■■■□ 3.45
NECTIN3-201ENST00000319792 TCP10L2B9ZVM9 353 aa36.58■■■■□ 3.45
NECTIN3-201ENST00000319792 CALM1P0DP23 149 aa36.58■■■■□ 3.45
NECTIN3-201ENST00000319792 CALM2P0DP24 149 aa36.58■■■■□ 3.45
NECTIN3-201ENST00000319792 CALM3P0DP25 149 aa36.58■■■■□ 3.45
NECTIN3-201ENST00000319792 NOVP48745 357 aa36.58■■■■□ 3.45
NECTIN3-201ENST00000319792 NBPF9Q3BBW0 867 aa36.58■■■■□ 3.45
NECTIN3-201ENST00000319792 KIF3AQ9Y496 699 aa36.58■■■■□ 3.45
NECTIN3-201ENST00000319792 CDKL5O76039 1030 aa36.57■■■■□ 3.44
NECTIN3-201ENST00000319792 ADD1P35611 737 aaKnown RBP36.57■■■■□ 3.44
NECTIN3-201ENST00000319792 TROAPQ12815 778 aa36.57■■■■□ 3.44
NECTIN3-201ENST00000319792 NTRK3Q16288 839 aa36.57■■■■□ 3.44
NECTIN3-201ENST00000319792 RTN1Q16799 776 aa36.57■■■■□ 3.44
NECTIN3-201ENST00000319792 LARP1BQ659C4 914 aaKnown RBP36.57■■■■□ 3.44
NECTIN3-201ENST00000319792 CPLX2Q6PUV4 134 aaKnown RBP36.57■■■■□ 3.44
NECTIN3-201ENST00000319792 NFKBIBQ15653 356 aa36.56■■■■□ 3.44
NECTIN3-201ENST00000319792 CRACR2BQ8N4Y2 399 aaPredicted RBP36.56■■■■□ 3.44
NECTIN3-201ENST00000319792 FANCBQ8NB91 859 aa36.56■■■■□ 3.44
NECTIN3-201ENST00000319792 DDX11Q96FC9 970 aa36.56■■■■□ 3.44
NECTIN3-201ENST00000319792 CCDC196A0A1B0GTZ2 297 aa36.55■■■■□ 3.44
NECTIN3-201ENST00000319792 CCDC17Q96LX7 622 aa36.55■■■■□ 3.44
NECTIN3-201ENST00000319792 GNL3Q9BVP2 549 aaKnown RBP eCLIP36.55■■■■□ 3.44
NECTIN3-201ENST00000319792 MTMR6Q9Y217 621 aa36.55■■■■□ 3.44
NECTIN3-201ENST00000319792 IGKV6D-41A0A0C4DH26 115 aa36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 FDPSP14324 419 aaKnown RBP36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 CCDC144CPQ8IYA2 1237 aa36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 FAM184AQ8NB25 1140 aa36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 VEZTQ9HBM0 779 aa36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 RNF181Q9P0P0 153 aa36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 EGFRP00533 1210 aa36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 ZSCAN22P10073 491 aaPredicted RBP36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 AKR1B1P15121 316 aa36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 TATDN1Q6P1N9 297 aa36.54■■■■□ 3.44
NECTIN3-201ENST00000319792 NUP133Q8WUM0 1156 aa36.53■■■■□ 3.44
NECTIN3-201ENST00000319792 CSRNP1Q96S65 589 aa36.53■■■■□ 3.44
NECTIN3-201ENST00000319792 KAT14Q9H8E8 782 aa36.53■■■■□ 3.44
NECTIN3-201ENST00000319792 GPRC5DQ9NZD1 345 aa36.53■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms