RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 KRI1Q8N9T8 703 aaKnown RBP23.8■■□□□ 1.4
CPNE7-202ENST00000319518 CDC5LQ99459 802 aaKnown RBP23.8■■□□□ 1.4
CPNE7-202ENST00000319518 KCNJ14Q9UNX9 436 aa23.8■■□□□ 1.4
CPNE7-202ENST00000319518 BTAF1O14981 1849 aa23.8■■□□□ 1.4
CPNE7-202ENST00000319518 CBFA2T2O43439 604 aa23.79■■□□□ 1.4
CPNE7-202ENST00000319518 PRKAB2O43741 272 aa23.79■■□□□ 1.4
CPNE7-202ENST00000319518 SSRP1Q08945 709 aaKnown RBP23.79■■□□□ 1.4
CPNE7-202ENST00000319518 MAP3K12Q12852 859 aa23.79■■□□□ 1.4
CPNE7-202ENST00000319518 CCNL1Q9UK58 526 aaPredicted RBP23.79■■□□□ 1.4
CPNE7-202ENST00000319518 NRDCO43847 1150 aa23.79■■□□□ 1.4
CPNE7-202ENST00000319518 PRR29P0C7W0 189 aa23.79■■□□□ 1.4
CPNE7-202ENST00000319518 IFNAR1P17181 557 aa23.79■■□□□ 1.4
CPNE7-202ENST00000319518 FMR1Q06787 632 aaKnown RBP eCLIP23.79■■□□□ 1.48e-7■□□□□ 8.2
CPNE7-202ENST00000319518 GSG1L2A8MUP6 293 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 MMP1P03956 469 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 OLFM4Q6UX06 510 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 MIGA1Q8NAN2 632 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 NAPBQ9H115 298 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 FBXO2Q9UK22 296 aaPredicted RBP23.78■■□□□ 1.4
CPNE7-202ENST00000319518 MAN1B1Q9UKM7 699 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 PHLPP2Q6ZVD8 1323 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 TOP1P11387 765 aaKnown RBP23.78■■□□□ 1.4
CPNE7-202ENST00000319518 ZKSCAN3Q9BRR0 538 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 ST7Q9NRC1 585 aa23.78■■□□□ 1.4
CPNE7-202ENST00000319518 CHD4Q14839 1912 aa23.77■■□□□ 1.4
CPNE7-202ENST00000319518 NID2Q14112 1375 aa23.77■■□□□ 1.4
CPNE7-202ENST00000319518 TBX2Q13207 712 aaPredicted RBP23.77■■□□□ 1.4
CPNE7-202ENST00000319518 DIS3L2Q8IYB7 885 aaKnown RBP23.77■■□□□ 1.4
CPNE7-202ENST00000319518 CMTR1Q8N1G2 835 aaKnown RBP23.77■■□□□ 1.4
CPNE7-202ENST00000319518 MED15Q96RN5 788 aa23.77■■□□□ 1.4
CPNE7-202ENST00000319518 RPS6KA4O75676 772 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 TUBB4AP04350 444 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 SF3B3Q15393 1217 aaKnown RBP23.76■■□□□ 1.39
CPNE7-202ENST00000319518 AKNAD1Q5T1N1 836 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 LCORLQ8N3X6 602 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 NARFQ9UHQ1 456 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 PTPREP23469 700 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 CLCN6P51797 869 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 ZNF827Q17R98 1081 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 GRAMD1CQ8IYS0 662 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 LRP2BPQ9P2M1 347 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 CASZ1Q86V15 1759 aa23.76■■□□□ 1.39
CPNE7-202ENST00000319518 VWA3AA6NCI4 1184 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 ZNF18P17022 549 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 NR5A1Q13285 461 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 ELOA2Q8IYF1 753 aaPredicted RBP23.75■■□□□ 1.39
CPNE7-202ENST00000319518 CCDC82Q8N4S0 544 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 ABCF2Q9UG63 623 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 MINPP1Q9UNW1 487 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 DOCK2Q92608 1830 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 KLRK1P26718 216 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 SARSP49591 514 aaKnown RBP23.75■■□□□ 1.39
CPNE7-202ENST00000319518 POSTNQ15063 836 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 NT5DC1Q5TFE4 455 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 ADGRA1Q86SQ6 560 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 SETDB2Q96T68 719 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 SERTAD1Q9UHV2 236 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 PCDHB6Q9Y5E3 794 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 ZNF831Q5JPB2 1677 aa23.75■■□□□ 1.39
CPNE7-202ENST00000319518 POLR2DO15514 142 aaKnown RBP23.74■■□□□ 1.39
CPNE7-202ENST00000319518 MYO1BO43795 1136 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 TERF2Q15554 542 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 ARHGAP29Q52LW3 1261 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 SLC51AQ86UW1 340 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 NBPF5PQ86XG9 351 aaPredicted RBP23.74■■□□□ 1.39
CPNE7-202ENST00000319518 PARP3Q9Y6F1 533 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 ZPR1O75312 459 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 USP49Q70CQ1 688 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 OXER1Q8TDS5 423 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 ARHGEF1Q92888 912 aaKnown RBP23.74■■□□□ 1.39
CPNE7-202ENST00000319518 SHISA4Q96DD7 197 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 FHOD1Q9Y613 1164 aa23.74■■□□□ 1.39
CPNE7-202ENST00000319518 CCP110O43303 1012 aa23.73■■□□□ 1.39
CPNE7-202ENST00000319518 RRP12Q5JTH9 1297 aaKnown RBP23.73■■□□□ 1.39
CPNE7-202ENST00000319518 MEX3CQ5U5Q3 659 aaKnown RBP23.73■■□□□ 1.39
CPNE7-202ENST00000319518 TRMT44Q8IYL2 757 aaKnown RBP23.73■■□□□ 1.39
CPNE7-202ENST00000319518 BSDC1Q9NW68 430 aaPredicted RBP23.73■■□□□ 1.39
CPNE7-202ENST00000319518 PPP2R2CQ9Y2T4 447 aa23.73■■□□□ 1.39
CPNE7-202ENST00000319518 COL1A1P02452 1464 aaPredicted RBP23.73■■□□□ 1.39
CPNE7-202ENST00000319518 SCN7AQ01118 1682 aa23.73■■□□□ 1.39
CPNE7-202ENST00000319518 MFSD6Q6ZSS7 791 aa23.73■■□□□ 1.39
CPNE7-202ENST00000319518 TC2NQ8N9U0 490 aa23.73■■□□□ 1.39
CPNE7-202ENST00000319518 NFE2L3Q9Y4A8 694 aa23.73■■□□□ 1.39
CPNE7-202ENST00000319518 RTN1Q16799 776 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 RC3H1Q5TC82 1133 aaKnown RBP23.72■■□□□ 1.39
CPNE7-202ENST00000319518 ZNF771Q7L3S4 317 aaPredicted RBP23.72■■□□□ 1.39
CPNE7-202ENST00000319518 FCHSD1Q86WN1 690 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 STAG1Q8WVM7 1258 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 CNNM2Q9H8M5 875 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 RTCBQ9Y3I0 505 aaKnown RBP23.72■■□□□ 1.39
CPNE7-202ENST00000319518 ARHGAP6O43182 974 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 MORC3Q14149 939 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 CRACR2BQ8N4Y2 399 aaPredicted RBP23.72■■□□□ 1.39
CPNE7-202ENST00000319518 KRT23Q9C075 422 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 FOXP1Q9H334 677 aaPredicted RBP23.72■■□□□ 1.39
CPNE7-202ENST00000319518 SLC4A4Q9Y6R1 1079 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 THSD7AQ9UPZ6 1657 aa23.72■■□□□ 1.39
CPNE7-202ENST00000319518 ACTN4O43707 911 aaKnown RBP23.71■■□□□ 1.39
CPNE7-202ENST00000319518 TADA3O75528 432 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms