RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 GDF11O95390 407 aa35.06■■■■□ 3.2
SYNGR1-202ENST00000318801 PLCD1P51178 756 aa35.06■■■■□ 3.2
SYNGR1-202ENST00000318801 PABPC4Q13310 644 aaKnown RBP eCLIP35.06■■■■□ 3.2
SYNGR1-202ENST00000318801 GPAT2Q6NUI2 795 aa35.06■■■■□ 3.2
SYNGR1-202ENST00000318801 FBXO46Q6PJ61 603 aaPredicted RBP35.06■■■■□ 3.2
SYNGR1-202ENST00000318801 CD99L2Q8TCZ2 262 aa35.06■■■■□ 3.2
SYNGR1-202ENST00000318801 APPBP2Q92624 585 aa35.06■■■■□ 3.2
SYNGR1-202ENST00000318801 ZBTB21Q9ULJ3 1066 aa35.06■■■■□ 3.2
SYNGR1-202ENST00000318801 PHIPQ8WWQ0 1821 aa35.05■■■■□ 3.2
SYNGR1-202ENST00000318801 NAV1Q8NEY1 1877 aa35.05■■■■□ 3.2
SYNGR1-202ENST00000318801 SMC5Q8IY18 1101 aa35.05■■■■□ 3.2
SYNGR1-202ENST00000318801 FSD1Q9BTV5 496 aa35.05■■■■□ 3.2
SYNGR1-202ENST00000318801 PUS7LQ9H0K6 701 aaKnown RBP35.05■■■■□ 3.2
SYNGR1-202ENST00000318801 PNMA3Q9UL41 463 aa35.05■■■■□ 3.2
SYNGR1-202ENST00000318801 TMOD4Q9NZQ9 345 aa35.04■■■■□ 3.2
SYNGR1-202ENST00000318801 AGTPBP1Q9UPW5 1226 aa35.04■■■■□ 3.2
SYNGR1-202ENST00000318801 C19orf81C9J6K1 198 aa35.03■■■■□ 3.2
SYNGR1-202ENST00000318801 PRKAB2O43741 272 aa35.03■■■■□ 3.2
SYNGR1-202ENST00000318801 ABCB5Q2M3G0 1257 aa35.03■■■■□ 3.2
SYNGR1-202ENST00000318801 B4GALNT3Q6L9W6 998 aa35.03■■■■□ 3.2
SYNGR1-202ENST00000318801 STAP2Q9UGK3 403 aa35.03■■■■□ 3.2
SYNGR1-202ENST00000318801 SWAP70Q9UH65 585 aa35.03■■■■□ 3.2
SYNGR1-202ENST00000318801 GH2P01242 217 aa35.02■■■■□ 3.2
SYNGR1-202ENST00000318801 HMGCS2P54868 508 aa35.02■■■■□ 3.2
SYNGR1-202ENST00000318801 OTOP1Q7RTM1 612 aa35.02■■■■□ 3.2
SYNGR1-202ENST00000318801 SMCR8Q8TEV9 937 aaPredicted RBP35.02■■■■□ 3.2
SYNGR1-202ENST00000318801 PTPRFP10586 1907 aa35.02■■■■□ 3.2
SYNGR1-202ENST00000318801 USP17L10C9JJH3 530 aa35.01■■■■□ 3.2
SYNGR1-202ENST00000318801 GNAT2P19087 354 aa35.01■■■■□ 3.2
SYNGR1-202ENST00000318801 BACE1P56817 501 aa35.01■■■■□ 3.2
SYNGR1-202ENST00000318801 C17orf99Q6UX52 265 aa35.01■■■■□ 3.2
SYNGR1-202ENST00000318801 LNPKQ9C0E8 428 aa35.01■■■■□ 3.2
SYNGR1-202ENST00000318801 CPA4Q9UI42 421 aa35.01■■■■□ 3.2
SYNGR1-202ENST00000318801 CHGBP05060 677 aa35■■■■□ 3.19
SYNGR1-202ENST00000318801 PDE1AP54750 535 aa35■■■■□ 3.19
SYNGR1-202ENST00000318801 STRBPQ96SI9 672 aaKnown RBP35■■■■□ 3.19
SYNGR1-202ENST00000318801 GNRH1P01148 92 aa35■■■■□ 3.19
SYNGR1-202ENST00000318801 CYP2C8P10632 490 aa35■■■■□ 3.19
SYNGR1-202ENST00000318801 RAB3GAP1Q15042 981 aa35■■■■□ 3.19
SYNGR1-202ENST00000318801 SH3D19Q5HYK7 790 aa35■■■■□ 3.19
SYNGR1-202ENST00000318801 SALL3Q9BXA9 1300 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 USP17L12C9JPN9 530 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 USP17L21D6R901 530 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 IGHDP01880 384 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 OSBPP22059 807 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 LACTBP83111 547 aaPredicted RBP34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 MTMR2Q13614 643 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 GIMAP6Q6P9H5 292 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 CHD1LQ86WJ1 897 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 EVI5LQ96CN4 794 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 HPS5Q9UPZ3 1129 aa34.99■■■■□ 3.19
SYNGR1-202ENST00000318801 SHMT1P34896 483 aa34.98■■■■□ 3.19
SYNGR1-202ENST00000318801 GABPAQ06546 454 aa34.98■■■■□ 3.19
SYNGR1-202ENST00000318801 OSBP2Q969R2 916 aa34.98■■■■□ 3.19
SYNGR1-202ENST00000318801 MPHOSPH10O00566 681 aaKnown RBP34.97■■■■□ 3.19
SYNGR1-202ENST00000318801 JAG1P78504 1218 aa34.97■■■■□ 3.19
SYNGR1-202ENST00000318801 C12orf60Q5U649 245 aa34.97■■■■□ 3.19
SYNGR1-202ENST00000318801 FEZ1Q99689 392 aa34.97■■■■□ 3.19
SYNGR1-202ENST00000318801 ARPP21Q9UBL0 812 aaPredicted RBP34.97■■■■□ 3.19
SYNGR1-202ENST00000318801 BAZ2AQ9UIF9 1905 aaKnown RBP34.96■■■■□ 3.19
SYNGR1-202ENST00000318801 APPP05067 770 aa34.96■■■■□ 3.19
SYNGR1-202ENST00000318801 NUCB1Q02818 461 aa34.96■■■■□ 3.19
SYNGR1-202ENST00000318801 DDX60LQ5H9U9 1706 aaKnown RBP34.95■■■■□ 3.19
SYNGR1-202ENST00000318801 GPAA1O43292 621 aa34.95■■■■□ 3.19
SYNGR1-202ENST00000318801 TREML2Q5T2D2 321 aa34.95■■■■□ 3.19
SYNGR1-202ENST00000318801 PTPN22Q9Y2R2 807 aa34.95■■■■□ 3.19
SYNGR1-202ENST00000318801 CYP2D6P10635 497 aa34.94■■■■□ 3.18
SYNGR1-202ENST00000318801 HOXD10P28358 340 aa34.94■■■■□ 3.18
SYNGR1-202ENST00000318801 USP14P54578 494 aa34.94■■■■□ 3.18
SYNGR1-202ENST00000318801 USP17L2Q6R6M4 530 aa34.94■■■■□ 3.18
SYNGR1-202ENST00000318801 TICAM2Q86XR7 235 aa34.94■■■■□ 3.18
SYNGR1-202ENST00000318801 NACAP1Q9BZK3 213 aa34.94■■■■□ 3.18
SYNGR1-202ENST00000318801 IRX6P78412 446 aaPredicted RBP34.93■■■■□ 3.18
SYNGR1-202ENST00000318801 CCDC17Q96LX7 622 aa34.93■■■■□ 3.18
SYNGR1-202ENST00000318801 ADGRA2Q96PE1 1338 aa34.92■■■■□ 3.18
SYNGR1-202ENST00000318801 GCLCP48506 637 aaPredicted RBP34.92■■■■□ 3.18
SYNGR1-202ENST00000318801 IRX3P78415 501 aaPredicted RBP34.92■■■■□ 3.18
SYNGR1-202ENST00000318801 SHROOM1Q2M3G4 852 aaPredicted RBP34.92■■■■□ 3.18
SYNGR1-202ENST00000318801 CTR9Q6PD62 1173 aa34.92■■■■□ 3.18
SYNGR1-202ENST00000318801 FMNL1O95466 1100 aaPredicted RBP34.91■■■■□ 3.18
SYNGR1-202ENST00000318801 PSMC4P43686 418 aa34.91■■■■□ 3.18
SYNGR1-202ENST00000318801 PRMT2P55345 433 aa34.91■■■■□ 3.18
SYNGR1-202ENST00000318801 GSG1L2A8MUP6 293 aa34.9■■■■□ 3.18
SYNGR1-202ENST00000318801 PATL2C9JE40 543 aaKnown RBP34.9■■■■□ 3.18
SYNGR1-202ENST00000318801 BCRP11274 1271 aa34.9■■■■□ 3.18
SYNGR1-202ENST00000318801 TDO2P48775 406 aa34.9■■■■□ 3.18
SYNGR1-202ENST00000318801 SBK1Q52WX2 424 aa34.9■■■■□ 3.18
SYNGR1-202ENST00000318801 TMEM179Q6ZVK1 233 aa34.9■■■■□ 3.18
SYNGR1-202ENST00000318801 DYNLL2Q96FJ2 89 aa34.9■■■■□ 3.18
SYNGR1-202ENST00000318801 MYH8P13535 1937 aa34.9■■■■□ 3.18
SYNGR1-202ENST00000318801 TRIM6-TRIM34B2RNG4 842 aa34.89■■■■□ 3.18
SYNGR1-202ENST00000318801 CDK8P49336 464 aa34.89■■■■□ 3.18
SYNGR1-202ENST00000318801 ZMYM1Q5SVZ6 1142 aa34.89■■■■□ 3.18
SYNGR1-202ENST00000318801 ASCC2Q9H1I8 757 aaPredicted RBP34.89■■■■□ 3.18
SYNGR1-202ENST00000318801 ZNF287Q9HBT7 754 aa34.89■■■■□ 3.18
SYNGR1-202ENST00000318801 LOC285556D6RIA3 1793 aa34.89■■■■□ 3.18
SYNGR1-202ENST00000318801 M0R2C6 588 aa34.88■■■■□ 3.17
SYNGR1-202ENST00000318801 HOXA7P31268 230 aaPredicted RBP34.88■■■■□ 3.17
SYNGR1-202ENST00000318801 FCGRTP55899 365 aa34.88■■■■□ 3.17
SYNGR1-202ENST00000318801 C16orf86Q6ZW13 317 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms