RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 HMGN5P82970 282 aaKnown RBP18.39■□□□□ 0.53
CALR-201ENST00000316448 L1TD1Q5T7N2 865 aaKnown RBP18.39■□□□□ 0.53
CALR-201ENST00000316448 FERMT3Q86UX7 667 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 TMTC2Q8N394 836 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 PRMT6Q96LA8 375 aaPredicted RBP18.39■□□□□ 0.53
CALR-201ENST00000316448 TAOK3Q9H2K8 898 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 MKNK2Q9HBH9 465 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 PSME4Q14997 1843 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 UBE2Q2LH0YL09 131 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 CXCL9Q07325 125 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 CFAP100Q494V2 611 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 FAM173BQ6P4H8 233 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 NIM1KQ8IY84 436 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 FAM184AQ8NB25 1140 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 FAM198AQ9UFP1 575 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 NID2Q14112 1375 aa18.38■□□□□ 0.53
CALR-201ENST00000316448 TSPY2A6NKD2 308 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 RASSF7Q02833 373 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 GABPAQ06546 454 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 CAVIN1Q6NZI2 390 aaKnown RBP18.37■□□□□ 0.53
CALR-201ENST00000316448 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 AMOTL1Q8IY63 956 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 PHKBQ93100 1093 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 OSBPL5Q9H0X9 879 aaPredicted RBP18.37■□□□□ 0.53
CALR-201ENST00000316448 TDRD3Q9H7E2 651 aaKnown RBP18.37■□□□□ 0.53
CALR-201ENST00000316448 GJB4Q9NTQ9 266 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 CNPY2Q9Y2B0 182 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 IFIT1BQ5T764 474 aaKnown RBP18.37■□□□□ 0.53
CALR-201ENST00000316448 OTUD7BQ6GQQ9 843 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 CHMP4CQ96CF2 233 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 AIFM3Q96NN9 605 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
CALR-201ENST00000316448 ORC3Q9UBD5 711 aaPredicted RBP18.37■□□□□ 0.53
CALR-201ENST00000316448 CPLX1O14810 134 aa18.36■□□□□ 0.53
CALR-201ENST00000316448 DHX16O60231 1041 aaKnown RBP18.36■□□□□ 0.53
CALR-201ENST00000316448 ZNF445P59923 1031 aa18.36■□□□□ 0.53
CALR-201ENST00000316448 GUCY1B3Q02153 619 aa18.36■□□□□ 0.53
CALR-201ENST00000316448 TCP10Q12799 353 aa18.36■□□□□ 0.53
CALR-201ENST00000316448 ILDR2Q71H61 639 aa18.36■□□□□ 0.53
CALR-201ENST00000316448 SH3BP5LQ7L8J4 393 aa18.36■□□□□ 0.53
CALR-201ENST00000316448 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
CALR-201ENST00000316448 NUP133Q8WUM0 1156 aa18.36■□□□□ 0.53
CALR-201ENST00000316448 TROAPQ12815 778 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 ZSCAN23Q3MJ62 389 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 ZNF444Q8N0Y2 327 aaPredicted RBP18.35■□□□□ 0.53
CALR-201ENST00000316448 FANCBQ8NB91 859 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 IDI2Q9BXS1 227 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 ECM29Q5VYK3 1845 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 SHTN1A0MZ66 631 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 DDTLA6NHG4 134 aaPredicted RBP18.35■□□□□ 0.53
CALR-201ENST00000316448 RESTQ13127 1097 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 RTN1Q16799 776 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
CALR-201ENST00000316448 SPON1Q9HCB6 807 aa18.35■□□□□ 0.53
CALR-201ENST00000316448 DNM1Q05193 864 aaKnown RBP18.34■□□□□ 0.53
CALR-201ENST00000316448 NBPF11Q86T75 865 aa18.34■□□□□ 0.53
CALR-201ENST00000316448 TTC6Q86TZ1 520 aa18.34■□□□□ 0.53
CALR-201ENST00000316448 GAS2L3Q86XJ1 694 aa18.34■□□□□ 0.53
CALR-201ENST00000316448 ANKS1AQ92625 1134 aa18.34■□□□□ 0.53
CALR-201ENST00000316448 TCP11L1Q9NUJ3 509 aa18.34■□□□□ 0.53
CALR-201ENST00000316448 TMEM63CQ9P1W3 806 aa18.34■□□□□ 0.53
CALR-201ENST00000316448 GADD45BO75293 160 aaPredicted RBP18.33■□□□□ 0.53
CALR-201ENST00000316448 NCLP19338 710 aaKnown RBP18.33■□□□□ 0.53
CALR-201ENST00000316448 GUCY1A2P33402 732 aa18.33■□□□□ 0.53
CALR-201ENST00000316448 KIF3AQ9Y496 699 aa18.33■□□□□ 0.53
CALR-201ENST00000316448 MYH15Q9Y2K3 1946 aa18.33■□□□□ 0.53
CALR-201ENST00000316448 MYO3BQ8WXR4 1341 aa18.33■□□□□ 0.52
CALR-201ENST00000316448 TSPY3P0CV98 308 aa18.33■□□□□ 0.52
CALR-201ENST00000316448 TSPY8P0CW00 308 aa18.33■□□□□ 0.52
CALR-201ENST00000316448 IFNAR1P17181 557 aa18.33■□□□□ 0.52
CALR-201ENST00000316448 MRE11P49959 708 aa18.33■□□□□ 0.52
CALR-201ENST00000316448 CCDC82Q8N4S0 544 aa18.33■□□□□ 0.52
CALR-201ENST00000316448 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.52
CALR-201ENST00000316448 DNAJC18Q9H819 358 aa18.33■□□□□ 0.52
CALR-201ENST00000316448 SPDYE2BA6NHP3 402 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 H3BQV1 296 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 SPDYE6P0CI01 402 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 RCAN1P53805 252 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 FUT2Q10981 343 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 IFFO2Q5TF58 517 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 CATIPQ7Z7H3 387 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 DGKHQ86XP1 1220 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 RBM27Q9P2N5 1060 aaKnown RBP18.32■□□□□ 0.52
CALR-201ENST00000316448 LTBP3Q9NS15 1303 aa18.32■□□□□ 0.52
CALR-201ENST00000316448 FIBPO43427 364 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 PLEKHA8P1O95397 391 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 XRCC6P12956 609 aaKnown RBP eCLIP18.31■□□□□ 0.52
CALR-201ENST00000316448 SHMT1P34896 483 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 UBE2HP62256 183 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 CIAPIN1Q6FI81 312 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 CRACR2BQ8N4Y2 399 aaPredicted RBP18.31■□□□□ 0.52
CALR-201ENST00000316448 AGBL3Q8NEM8 1001 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 JDP2Q8WYK2 163 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 SLC26A6Q9BXS9 759 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 FHDC1Q9C0D6 1143 aaPredicted RBP18.31■□□□□ 0.52
CALR-201ENST00000316448 GRPEL1Q9HAV7 217 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 SERPINB13Q9UIV8 391 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms