RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 RFX5P48382 616 aaPredicted RBP15.52■□□□□ 0.08
DDX54-202ENST00000314045 KRT25Q7Z3Z0 450 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 TXLNBQ8N3L3 684 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 HOOK2Q96ED9 719 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 SCLT1Q96NL6 688 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 BTBD18B2RXH4 712 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 LIG1P18858 919 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 COL5A2P05997 1499 aaPredicted RBP15.52■□□□□ 0.07
DDX54-202ENST00000314045 MYOM1P52179 1685 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 ADCY7P51828 1080 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 GPS2Q13227 327 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 KIAA1328Q86T90 577 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 SYCP3Q8IZU3 236 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 CPXCR1Q8N123 301 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 NSUN7Q8NE18 718 aaKnown RBP15.52■□□□□ 0.07
DDX54-202ENST00000314045 KAZALD1Q96I82 304 aa15.52■□□□□ 0.07
DDX54-202ENST00000314045 FAM84BQ96KN1 310 aaPredicted RBP15.52■□□□□ 0.07
DDX54-202ENST00000314045 C21orf2O43822 256 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 LARGE1O95461 756 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 INTS5Q6P9B9 1019 aaKnown RBP15.51■□□□□ 0.07
DDX54-202ENST00000314045 FAM114A1Q8IWE2 563 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 MPHOSPH6Q99547 160 aaKnown RBP15.51■□□□□ 0.07
DDX54-202ENST00000314045 BRIP1Q9BX63 1249 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 GPHNQ9NQX3 736 aaPredicted RBP15.51■□□□□ 0.07
DDX54-202ENST00000314045 SERPINB13Q9UIV8 391 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 CLRN2A0PK11 232 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 NTSR2O95665 410 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 REXO1Q8N1G1 1221 aaKnown RBP15.51■□□□□ 0.07
DDX54-202ENST00000314045 POLR2DO15514 142 aaKnown RBP15.51■□□□□ 0.07
DDX54-202ENST00000314045 NEMFO60524 1076 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 STX17P56962 302 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 SPAG1Q07617 926 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 NOSTRINQ8IVI9 506 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 CCDC17Q96LX7 622 aa15.51■□□□□ 0.07
DDX54-202ENST00000314045 CCNT1O60563 726 aaKnown RBP15.5■□□□□ 0.07
DDX54-202ENST00000314045 DDAH1O94760 285 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 TXKP42681 527 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 NAP1L4Q99733 375 aaKnown RBP15.5■□□□□ 0.07
DDX54-202ENST00000314045 CNTNAP4Q9C0A0 1308 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 SMCO2A6NFE2 343 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 ZNF202O95125 648 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 SCG2P13521 617 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 ICA1Q05084 483 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 ENOX2Q16206 610 aaKnown RBP15.5■□□□□ 0.07
DDX54-202ENST00000314045 PRR5LQ6MZQ0 368 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 CLSTN2Q9H4D0 955 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 USP42Q9H9J4 1324 aaKnown RBP15.5■□□□□ 0.07
DDX54-202ENST00000314045 PTPN14Q15678 1187 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 USH1GQ495M9 461 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 LUZP1Q86V48 1076 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 DYNLL2Q96FJ2 89 aa15.5■□□□□ 0.07
DDX54-202ENST00000314045 PLCD1P51178 756 aa15.49■□□□□ 0.07
DDX54-202ENST00000314045 TMOD4Q9NZQ9 345 aa15.49■□□□□ 0.07
DDX54-202ENST00000314045 ZSCAN12O43309 604 aa15.49■□□□□ 0.07
DDX54-202ENST00000314045 TRMT1Q9NXH9 659 aaKnown RBP15.49■□□□□ 0.07
DDX54-202ENST00000314045 USP17L3A6NCW0 530 aa15.49■□□□□ 0.07
DDX54-202ENST00000314045 USP17L4A6NCW7 530 aa15.49■□□□□ 0.07
DDX54-202ENST00000314045 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
DDX54-202ENST00000314045 HSP90AA2PQ14568 343 aaPredicted RBP15.49■□□□□ 0.07
DDX54-202ENST00000314045 SPA17Q15506 151 aa15.49■□□□□ 0.07
DDX54-202ENST00000314045 USP17L1Q7RTZ2 530 aa15.49■□□□□ 0.07
DDX54-202ENST00000314045 TMEM63CQ9P1W3 806 aa15.49■□□□□ 0.07
DDX54-202ENST00000314045 FRMPD2Q68DX3 1309 aaPredicted RBP15.49■□□□□ 0.07
DDX54-202ENST00000314045 LIFRP42702 1097 aa15.48■□□□□ 0.07
DDX54-202ENST00000314045 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
DDX54-202ENST00000314045 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.48■□□□□ 0.07
DDX54-202ENST00000314045 PLEKHG2Q9H7P9 1386 aa15.48■□□□□ 0.07
DDX54-202ENST00000314045 CHURC1Q8WUH1 139 aa15.48■□□□□ 0.07
DDX54-202ENST00000314045 CSRNP1Q96S65 589 aa15.48■□□□□ 0.07
DDX54-202ENST00000314045 RTKN2Q8IZC4 609 aa15.48■□□□□ 0.07
DDX54-202ENST00000314045 BLIDQ8IZY5 108 aa15.48■□□□□ 0.07
DDX54-202ENST00000314045 ZNF408Q9H9D4 720 aa15.48■□□□□ 0.07
DDX54-202ENST00000314045 B4DLN1 442 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 ZBTB7AO95365 584 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 CFBP00751 764 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 ABCB5Q2M3G0 1257 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 RBSNQ9H1K0 784 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 RFX7Q2KHR2 1363 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 RPAP1Q9BWH6 1393 aaPredicted RBP15.47■□□□□ 0.07
DDX54-202ENST00000314045 TDRD12Q587J7 1177 aaKnown RBP15.47■□□□□ 0.07
DDX54-202ENST00000314045 SLFN13Q68D06 897 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 GPKOWQ92917 476 aaPredicted RBP eCLIP15.47■□□□□ 0.07
DDX54-202ENST00000314045 FERMT2Q96AC1 680 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 GOPCQ9HD26 462 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 KIF13AQ9H1H9 1805 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 GPSM2P81274 684 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 CETN1Q12798 172 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 DALRD3Q5D0E6 543 aaKnown RBP15.47■□□□□ 0.07
DDX54-202ENST00000314045 ADALQ6DHV7 355 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 PODNQ7Z5L7 613 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 RNF26Q9BY78 433 aaPredicted RBP15.47■□□□□ 0.07
DDX54-202ENST00000314045 PKD2L1Q9P0L9 805 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 ABCC12Q96J65 1359 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
DDX54-202ENST00000314045 GRM1Q13255 1194 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 GPR162Q16538 588 aa15.47■□□□□ 0.07
DDX54-202ENST00000314045 NSMFQ6X4W1 530 aa15.46■□□□□ 0.07
DDX54-202ENST00000314045 KIFC2Q96AC6 838 aa15.46■□□□□ 0.07
DDX54-202ENST00000314045 CTAGE1Q96RT6 745 aa15.46■□□□□ 0.07
DDX54-202ENST00000314045 UBN2Q6ZU65 1347 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms