RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 IFT74Q96LB3 600 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 LLPHQ9BRT6 129 aaKnown RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 SERTAD1Q9UHV2 236 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 ERCC6LQ2NKX8 1250 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 UBL4BQ8N7F7 174 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 TACO1Q9BSH4 297 aaKnown RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 PFDN4Q9NQP4 134 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 IMPACTQ9P2X3 320 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 CCDC14Q49A88 953 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 VSIG1Q86XK7 387 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 ANKRD42Q8N9B4 389 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 MLKLQ8NB16 471 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 RNF34Q969K3 372 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 RIMS2Q9UQ26 1411 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 A1BGP04217 495 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 ZAP70P43403 619 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 TTC19Q6DKK2 380 aaPredicted RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 MYCT1Q8N699 235 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 CCDC110Q8TBZ0 833 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 CABS1Q96KC9 395 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 DDX21Q9NR30 783 aaKnown RBP eCLIP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 GPATCH8Q9UKJ3 1502 aaKnown RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 MAP3K19Q56UN5 1328 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 CETN3O15182 167 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 MRPL12P52815 198 aaKnown RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 PTPN21Q16825 1174 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 CCDC105Q8IYK2 499 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 APPBP2Q92624 585 aa9.48□□□□□ -0.89
ERCC4-201ENST00000311895 METTL22Q9BUU2 404 aaPredicted RBP9.48□□□□□ -0.89
ERCC4-201ENST00000311895 TXNDC9O14530 226 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 KLHL30Q0D2K2 578 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 PUM3Q15397 648 aaKnown RBP9.47□□□□□ -0.89
ERCC4-201ENST00000311895 VWA3BQ502W6 1294 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 SDCCAG8Q86SQ7 713 aaPredicted RBP9.47□□□□□ -0.89
ERCC4-201ENST00000311895 C2CD5Q86YS7 1000 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 DNAJC5BQ9UF47 199 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 DENND2AQ9ULE3 1009 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 TNRQ92752 1358 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 ARHGAP6O43182 974 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 GCP02774 474 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 ATP1A2P50993 1020 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 ADAT2Q7Z6V5 191 aaKnown RBP9.47□□□□□ -0.89
ERCC4-201ENST00000311895 MCUR1Q96AQ8 359 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 UFL1O94874 794 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 TBC1D8O95759 1140 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 HMGB2P26583 209 aaKnown RBP9.47□□□□□ -0.89
ERCC4-201ENST00000311895 ITIH3Q06033 890 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 TCP10Q12799 353 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 NPATQ14207 1427 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 ZNF790Q6PG37 636 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 TMTC1Q8IUR5 882 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 MRPL44Q9H9J2 332 aaKnown RBP9.47□□□□□ -0.89
ERCC4-201ENST00000311895 DDX41Q9UJV9 622 aaKnown RBP9.47□□□□□ -0.89
ERCC4-201ENST00000311895 ZNF532Q9HCE3 1301 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 E7EWF7 191 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 CLGNO14967 610 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 DAPK3O43293 454 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 GBP1P32455 592 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 CALCRLQ16602 461 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 ZNF827Q17R98 1081 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 DENND4BO75064 1496 aaPredicted RBP9.47□□□□□ -0.89
ERCC4-201ENST00000311895 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
ERCC4-201ENST00000311895 BUB1O43683 1085 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 CASC4Q6P4E1 433 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 CCT6BQ92526 530 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 EEF2KMTQ96G04 330 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 DCAF5Q96JK2 942 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 LRWD1Q9UFC0 647 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 BAIAP2L1Q9UHR4 511 aa9.47□□□□□ -0.89
ERCC4-201ENST00000311895 GNPATO15228 680 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 HIBADHP31937 336 aaKnown RBP9.46□□□□□ -0.89
ERCC4-201ENST00000311895 HHATQ5VTY9 493 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 PEX26Q7Z412 305 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 CCDC170Q8IYT3 715 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 IFIH1Q9BYX4 1025 aaKnown RBP9.46□□□□□ -0.89
ERCC4-201ENST00000311895 ANKRD2Q9GZV1 360 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 TTLL3Q9Y4R7 772 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 ARHGEF35A5YM69 484 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 KRT15P19012 456 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 ABCB4P21439 1286 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 PTH1RQ03431 593 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 TRPC3Q13507 836 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 CABP7Q86V35 215 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 MIPOL1Q8TD10 442 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 FAM114A2Q9NRY5 505 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 BIN2Q9UBW5 565 aaPredicted RBP9.46□□□□□ -0.89
ERCC4-201ENST00000311895 SMTNP53814 917 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 RPS6KA1Q15418 735 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 NUP58Q9BVL2 599 aa9.46□□□□□ -0.89
ERCC4-201ENST00000311895 FEZ2Q9UHY8 353 aaPredicted RBP9.46□□□□□ -0.89
ERCC4-201ENST00000311895 CFAP43Q8NDM7 1665 aa9.46□□□□□ -0.9
ERCC4-201ENST00000311895 GRIN2AQ12879 1464 aa9.46□□□□□ -0.9
ERCC4-201ENST00000311895 GMNNO75496 209 aa9.46□□□□□ -0.9
ERCC4-201ENST00000311895 TAF12Q16514 161 aa9.46□□□□□ -0.9
ERCC4-201ENST00000311895 CFAP221Q4G0U5 840 aa9.46□□□□□ -0.9
ERCC4-201ENST00000311895 SFMBT2Q5VUG0 894 aa9.46□□□□□ -0.9
ERCC4-201ENST00000311895 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.9
ERCC4-201ENST00000311895 CACNA2D3Q8IZS8 1091 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms