RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 AKNAD1Q5T1N1 836 aa15.3■□□□□ 0.04
APTX-201ENST00000309615 RGMBQ6NW40 437 aa15.3■□□□□ 0.04
APTX-201ENST00000309615 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
APTX-201ENST00000309615 SLC10A4Q96EP9 437 aa15.3■□□□□ 0.04
APTX-201ENST00000309615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
APTX-201ENST00000309615 RASSF10A6NK89 507 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 SEC24BO95487 1268 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 GH2P01242 217 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 FGRP09769 529 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 AKR1B1P15121 316 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 ABCB5Q2M3G0 1257 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 HHIPL1Q96JK4 782 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 LAMA4Q16363 1823 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
APTX-201ENST00000309615 SLC27A2O14975 620 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 MFSD6Q6ZSS7 791 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 CCDC84Q86UT8 332 aaPredicted RBP15.29■□□□□ 0.04
APTX-201ENST00000309615 STAG1Q8WVM7 1258 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 ZBTB21Q9ULJ3 1066 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 NEDD4P46934 1319 aa15.29■□□□□ 0.04
APTX-201ENST00000309615 ASNSP08243 561 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 PTPRAP18433 802 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 DEFB115Q30KQ5 88 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 FAM47AQ5JRC9 791 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
APTX-201ENST00000309615 CREB3L3Q68CJ9 461 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 PAXIP1Q6ZW49 1069 aaPredicted RBP15.28■□□□□ 0.04
APTX-201ENST00000309615 ZNF444Q8N0Y2 327 aaPredicted RBP15.28■□□□□ 0.04
APTX-201ENST00000309615 NKX2-3Q8TAU0 364 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 OPTNQ96CV9 577 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 USP26Q9BXU7 913 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 TOMM22Q9NS69 142 aa15.28■□□□□ 0.04
APTX-201ENST00000309615 ORC4O43929 436 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 GUCY1A2P33402 732 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 GJA5P36382 358 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
APTX-201ENST00000309615 GRM1Q13255 1194 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 CYP4F22Q6NT55 531 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 ERO1BQ86YB8 467 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 RASAL3Q86YV0 1011 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 OTUD5Q96G74 571 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 CCDC17Q96LX7 622 aa15.27■□□□□ 0.04
APTX-201ENST00000309615 RNF41Q9H4P4 317 aaPredicted RBP15.27■□□□□ 0.04
APTX-201ENST00000309615 DOCK1Q14185 1865 aa15.27■□□□□ 0.03
APTX-201ENST00000309615 SPDYE5A6NIY4 337 aa15.27■□□□□ 0.03
APTX-201ENST00000309615 RANBP6O60518 1105 aaKnown RBP15.27■□□□□ 0.03
APTX-201ENST00000309615 SEPT2Q15019 361 aa15.27■□□□□ 0.03
APTX-201ENST00000309615 STOX1Q6ZVD7 989 aa15.27■□□□□ 0.03
APTX-201ENST00000309615 WNK4Q96J92 1243 aa15.27■□□□□ 0.03
APTX-201ENST00000309615 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.27■□□□□ 0.03
APTX-201ENST00000309615 CABP5Q9NP86 173 aa15.27■□□□□ 0.03
APTX-201ENST00000309615 ZHX2Q9Y6X8 837 aa15.27■□□□□ 0.03
APTX-201ENST00000309615 FAM155AB1AL88 458 aaPredicted RBP15.26■□□□□ 0.03
APTX-201ENST00000309615 SLC10A3P09131 477 aa15.26■□□□□ 0.03
APTX-201ENST00000309615 PCP11498 1178 aaKnown RBP15.26■□□□□ 0.03
APTX-201ENST00000309615 TFAP4Q01664 338 aa15.26■□□□□ 0.03
APTX-201ENST00000309615 TMEM179Q6ZVK1 233 aa15.26■□□□□ 0.03
APTX-201ENST00000309615 CLEC10AQ8IUN9 316 aa15.26■□□□□ 0.03
APTX-201ENST00000309615 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
APTX-201ENST00000309615 GINM1Q9NU53 330 aa15.26■□□□□ 0.03
APTX-201ENST00000309615 MYH8P13535 1937 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 ATAD5Q96QE3 1844 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 B4E1Z4 1266 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 E7EWF7 191 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 EPB41L2O43491 1005 aaKnown RBP15.25■□□□□ 0.03
APTX-201ENST00000309615 TSPY3P0CV98 308 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 TSPY8P0CW00 308 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 HSPA4P34932 840 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 PPATQ06203 517 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 RNF20Q5VTR2 975 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 SPRYD7Q5W111 196 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 CCDC102AQ96A19 550 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 CAPNS2Q96L46 248 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 TSPY2A6NKD2 308 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 USP17L5A8MUK1 530 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 IRF6O14896 467 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
APTX-201ENST00000309615 KDM4AO75164 1064 aa15.24■□□□□ 0.03
APTX-201ENST00000309615 VEGFBP49765 207 aa15.24■□□□□ 0.03
APTX-201ENST00000309615 PPIL2Q13356 520 aa15.24■□□□□ 0.03
APTX-201ENST00000309615 NEDD1Q8NHV4 660 aa15.24■□□□□ 0.03
APTX-201ENST00000309615 ESR2Q92731 530 aa15.24■□□□□ 0.03
APTX-201ENST00000309615 CNNM2Q9H8M5 875 aa15.24■□□□□ 0.03
APTX-201ENST00000309615 PLIN4Q96Q06 1357 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 NMT2O60551 498 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
APTX-201ENST00000309615 SPP2Q13103 211 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 COL9A3Q14050 684 aaPredicted RBP15.23■□□□□ 0.03
APTX-201ENST00000309615 SIAH1Q8IUQ4 282 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 ZNF280CQ8ND82 737 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 KCNB2Q92953 911 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 CEP95Q96GE4 821 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 ZIC5Q96T25 663 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 KRT23Q9C075 422 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 IL17RBQ9NRM6 502 aa15.23■□□□□ 0.03
APTX-201ENST00000309615 ZSWIM5Q9P217 1185 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms