RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 KYAT1Q16773 422 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 NBPF20Q3BBV1 942 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 SPAG5Q96R06 1193 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 ESYT1Q9BSJ8 1104 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 KCND2Q9NZV8 630 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 ZMYM6O95789 1325 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 CIAO1O76071 339 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 ERCC3P19447 782 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 SNRPFP62306 86 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 METTL24Q5JXM2 366 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 FYB2Q5VWT5 728 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 LMNTD2Q8IXW0 634 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 CUTAO60888 179 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 ALDH1B1P30837 517 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 PAK2Q13177 524 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 WTAPQ15007 396 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 GPATCH4Q5T3I0 446 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 BANK1Q8NDB2 785 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 CAPZA3Q96KX2 299 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 KRT16P08779 473 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 STAT6P42226 847 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 PDZD4Q76G19 769 aaPredicted RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 EEF1GP26641 437 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 TTC1Q99614 292 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 SIL1Q9H173 461 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 GOLGA8BA8MQT2 603 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 KIAA0391O15091 583 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 SPTLC2O15270 562 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 LACTBP83111 547 aaPredicted RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 IKQ13123 557 aaPredicted RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 TTC25Q96NG3 672 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 NWD1Q149M9 1564 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 PSMA4P25789 261 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 KRT2P35908 639 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 CCDC129Q6ZRS4 1044 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 ZNF579Q8NAF0 562 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 ANAPC4Q9UJX5 808 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 MECOMQ03112 1051 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 WHAMMP3Q1A5X7 153 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 EFCAB13Q8IY85 973 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 ANKRD35Q8N283 1001 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 TBC1D2Q9BYX2 928 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 FGFR1OP2Q9NVK5 253 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 DCCP43146 1447 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 LIN9Q5TKA1 542 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 FOXP3Q9BZS1 431 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.47□□□□□ -1.69
USH2A-201ENST00000307340 POLR2BP30876 1174 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 SURF1Q15526 300 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 RTN1Q16799 776 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 TMEM87AQ8NBN3 555 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 TIPINQ9BVW5 301 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 RSPH10B2B2RC85 870 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 RSPH10BP0C881 870 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 TPTE2Q6XPS3 522 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 NLRP3Q96P20 1036 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 IPO11Q9UI26 975 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 HNRNPRO43390 633 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 FKBP4Q02790 459 aaKnown RBP eCLIP4.47□□□□□ -1.69
USH2A-201ENST00000307340 UTP14CQ5TAP6 766 aaKnown RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 TOM1L2Q6ZVM7 507 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 NEK11Q8NG66 645 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 ARPP21Q9UBL0 812 aaPredicted RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 TNKSO95271 1327 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 BIN1O00499 593 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 F13A1P00488 732 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 MYRIPQ8NFW9 859 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 FAF1Q9UNN5 650 aaPredicted RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 ARHGAP4P98171 946 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 CC2D2BQ6DHV5 1058 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 GIMAP8Q8ND71 665 aaPredicted RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 ZFP91Q96JP5 570 aaPredicted RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 MYO5BQ9ULV0 1848 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 TSPY3P0CV98 308 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 TSPY8P0CW00 308 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 NOLC1Q14978 699 aaKnown RBP eCLIP4.47□□□□□ -1.69
USH2A-201ENST00000307340 MSL1Q68DK7 614 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 RABGGTAQ92696 567 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 TRIM63Q969Q1 353 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 TBC1D31Q96DN5 1066 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 RAI14Q9P0K7 980 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 PREX1Q8TCU6 1659 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 AKR1B15C9JRZ8 316 aaPredicted RBP4.47□□□□□ -1.69
USH2A-201ENST00000307340 NRBF2Q96F24 287 aa4.47□□□□□ -1.69
USH2A-201ENST00000307340 ARHGEF28Q8N1W1 1705 aaKnown RBP4.46□□□□□ -1.69
USH2A-201ENST00000307340 N4BP3O15049 544 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 KIF1CO43896 1103 aaKnown RBP4.46□□□□□ -1.69
USH2A-201ENST00000307340 ATP8B2P98198 1209 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 ODR4Q5SWX8 454 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 RNF10Q8N5U6 811 aaKnown RBP4.46□□□□□ -1.69
USH2A-201ENST00000307340 FAM8A1Q9UBU6 413 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 GFPT2O94808 682 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 ARHGEF6Q15052 776 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 MAP7D1Q3KQU3 841 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 MAML3Q96JK9 1138 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 FRMD8Q9BZ67 464 aaPredicted RBP4.46□□□□□ -1.69
USH2A-201ENST00000307340 MID2Q9UJV3 735 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 COPB2P35606 906 aa4.46□□□□□ -1.69
USH2A-201ENST00000307340 ZNF233A6NK53 670 aa4.46□□□□□ -1.7
USH2A-201ENST00000307340 MYO1EQ12965 1108 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms