RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 CXCR5P32302 372 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 WDR44Q5JSH3 913 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 CCDC62Q6P9F0 684 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 ZNF365Q70YC5 407 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 HS2ST1Q7LGA3 356 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 CTAGE3PQ8IX95 158 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 LMNTD2Q8IXW0 634 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 CACNA2D3Q8IZS8 1091 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 ZNF653Q96CK0 615 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 CABS1Q96KC9 395 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 BRD3Q15059 726 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 SMAD1Q15797 465 aaKnown RBP14.05□□□□□ -0.16
USP38-201ENST00000307017 C2CD5Q86YS7 1000 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 XPO4Q9C0E2 1151 aaKnown RBP14.05□□□□□ -0.16
USP38-201ENST00000307017 MRPL44Q9H9J2 332 aaKnown RBP14.05□□□□□ -0.16
USP38-201ENST00000307017 XAB2Q9HCS7 855 aaKnown RBP14.05□□□□□ -0.16
USP38-201ENST00000307017 UQCRFS1P1P0C7P4 283 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 HFM1A2PYH4 1435 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 IFNAR2P48551 515 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 DHX32Q7L7V1 743 aaKnown RBP14.04□□□□□ -0.16
USP38-201ENST00000307017 CCDC13Q8IYE1 715 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 ABTB1Q969K4 478 aaPredicted RBP14.04□□□□□ -0.16
USP38-201ENST00000307017 DDX41Q9UJV9 622 aaKnown RBP14.04□□□□□ -0.16
USP38-201ENST00000307017 LDHCP07864 332 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 PAK1Q13153 545 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 SNX1Q13596 522 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 EIF4A2Q14240 407 aaKnown RBP14.04□□□□□ -0.16
USP38-201ENST00000307017 ANO1Q5XXA6 986 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 U2AF1L4Q8WU68 220 aaKnown RBP14.04□□□□□ -0.16
USP38-201ENST00000307017 TMEM63CQ9P1W3 806 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 ITKQ08881 620 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 SESTD1Q86VW0 696 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 ANKRD13CQ8N6S4 541 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 SERTAD1Q9UHV2 236 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 PCDHB13Q9Y5F0 798 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 HECW1Q76N89 1606 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 KCNK3O14649 394 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 PRPHP41219 470 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 PYM1Q9BRP8 204 aaKnown RBP14.04□□□□□ -0.16
USP38-201ENST00000307017 ST7Q9NRC1 585 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 G3BP2Q9UN86 482 aaKnown RBP14.04□□□□□ -0.16
USP38-201ENST00000307017 SPECC1L-ADORA2AF8WAN1 911 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 RNF10Q8N5U6 811 aaKnown RBP14.04□□□□□ -0.16
USP38-201ENST00000307017 USP28Q96RU2 1077 aa14.04□□□□□ -0.16
USP38-201ENST00000307017 GAS8O95995 478 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 ZSCAN26Q16670 478 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 IFNB1P01574 187 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 RCN2Q14257 317 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 CNGA4Q8IV77 575 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 SCYL1Q96KG9 808 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 HELLSQ9NRZ9 838 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 KRT71Q3SY84 523 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 SPDL1Q96EA4 605 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 RAD50Q92878 1312 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 SBNO1A3KN83 1393 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 HP1BP3Q5SSJ5 553 aaPredicted RBP14.03□□□□□ -0.16
USP38-201ENST00000307017 TTC30BQ8N4P2 665 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 FNDC3AQ9Y2H6 1198 aaKnown RBP14.03□□□□□ -0.16
USP38-201ENST00000307017 LDHBP07195 334 aaKnown RBP14.03□□□□□ -0.16
USP38-201ENST00000307017 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 MYRIPQ8NFW9 859 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 LRRC45Q96CN5 670 aa14.03□□□□□ -0.16
USP38-201ENST00000307017 ATICP31939 592 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 TRPC3Q13507 836 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 CUL4BQ13620 913 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 PRR16Q569H4 304 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 FAM133BQ5BKY9 247 aaKnown RBP14.02□□□□□ -0.16
USP38-201ENST00000307017 DENND2CQ68D51 928 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 IFT20Q8IY31 132 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 SMYD4Q8IYR2 804 aaPredicted RBP14.02□□□□□ -0.16
USP38-201ENST00000307017 ZCRB1Q8TBF4 217 aaKnown RBP14.02□□□□□ -0.16
USP38-201ENST00000307017 PPP1R16BQ96T49 567 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 RTL9Q8NET4 1388 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.16
USP38-201ENST00000307017 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 TPH2Q8IWU9 490 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 RNF169Q8NCN4 708 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 NOX5Q96PH1 765 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 STX10O60499 249 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 GOLGA8HP0CJ92 632 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 ATF7P17544 494 aaPredicted RBP14.02□□□□□ -0.16
USP38-201ENST00000307017 B4GALNT4Q76KP1 1039 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 IQUBQ8NA54 791 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 DBNDD2Q9BQY9 259 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 VCX3BQ9H321 246 aa14.02□□□□□ -0.16
USP38-201ENST00000307017 SWAP70Q9UH65 585 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 CTNNA1P35221 906 aaKnown RBP14.02□□□□□ -0.17
USP38-201ENST00000307017 SERPINB6P35237 376 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 CCT5P48643 541 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 C2orf54Q08AI8 447 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 CCDC89Q8N998 374 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 SNX21Q969T3 373 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 PDE11AQ9HCR9 933 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 TECP42680 631 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 CEP128Q6ZU80 1094 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 GDAP1Q8TB36 358 aa14.02□□□□□ -0.17
USP38-201ENST00000307017 WDR91A4D1P6 747 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 POSTNQ15063 836 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms