RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 GINM1Q9NU53 330 aa19.28■□□□□ 0.68
SRGAP2C-201ENST00000304465 SLC45A1Q9Y2W3 748 aa19.28■□□□□ 0.68
SRGAP2C-201ENST00000304465 SEC24BO95487 1268 aa19.27■□□□□ 0.67
SRGAP2C-201ENST00000304465 POLR3DP05423 398 aaPredicted RBP19.27■□□□□ 0.67
SRGAP2C-201ENST00000304465 CYP2C8P10632 490 aa19.27■□□□□ 0.67
SRGAP2C-201ENST00000304465 ZSCAN25Q6NSZ9 544 aa19.27■□□□□ 0.67
SRGAP2C-201ENST00000304465 SMCR8Q8TEV9 937 aaPredicted RBP19.27■□□□□ 0.67
SRGAP2C-201ENST00000304465 SERPINB13Q9UIV8 391 aa19.27■□□□□ 0.67
SRGAP2C-201ENST00000304465 PNMA3Q9UL41 463 aa19.27■□□□□ 0.67
SRGAP2C-201ENST00000304465 AGTPBP1Q9UPW5 1226 aa19.27■□□□□ 0.67
SRGAP2C-201ENST00000304465 GNRH1P01148 92 aa19.26■□□□□ 0.67
SRGAP2C-201ENST00000304465 PABPC4Q13310 644 aaKnown RBP eCLIP19.26■□□□□ 0.67
SRGAP2C-201ENST00000304465 RRP1BQ14684 758 aaKnown RBP19.26■□□□□ 0.67
SRGAP2C-201ENST00000304465 PROCA1Q8NCQ7 364 aaPredicted RBP19.26■□□□□ 0.67
SRGAP2C-201ENST00000304465 DNAJC18Q9H819 358 aa19.26■□□□□ 0.67
SRGAP2C-201ENST00000304465 GLRX3O76003 335 aaKnown RBP19.25■□□□□ 0.67
SRGAP2C-201ENST00000304465 ECM2O94769 699 aaPredicted RBP19.25■□□□□ 0.67
SRGAP2C-201ENST00000304465 GDF11O95390 407 aa19.25■□□□□ 0.67
SRGAP2C-201ENST00000304465 FMNL1O95466 1100 aaPredicted RBP19.25■□□□□ 0.67
SRGAP2C-201ENST00000304465 HOXD10P28358 340 aa19.25■□□□□ 0.67
SRGAP2C-201ENST00000304465 HMGCS2P54868 508 aa19.25■□□□□ 0.67
SRGAP2C-201ENST00000304465 EHD4Q9H223 541 aa19.25■□□□□ 0.67
SRGAP2C-201ENST00000304465 MCM9Q9NXL9 1143 aa19.25■□□□□ 0.67
SRGAP2C-201ENST00000304465 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
SRGAP2C-201ENST00000304465 ADD2P35612 726 aa19.24■□□□□ 0.67
SRGAP2C-201ENST00000304465 PSMC4P43686 418 aa19.24■□□□□ 0.67
SRGAP2C-201ENST00000304465 NBPF11Q86T75 865 aa19.24■□□□□ 0.67
SRGAP2C-201ENST00000304465 DDRGK1Q96HY6 314 aa19.24■□□□□ 0.67
SRGAP2C-201ENST00000304465 ARHGAP39Q9C0H5 1083 aa19.24■□□□□ 0.67
SRGAP2C-201ENST00000304465 TMOD4Q9NZQ9 345 aa19.24■□□□□ 0.67
SRGAP2C-201ENST00000304465 PRMT2P55345 433 aa19.23■□□□□ 0.67
SRGAP2C-201ENST00000304465 SLC9C1Q4G0N8 1177 aa19.23■□□□□ 0.67
SRGAP2C-201ENST00000304465 LCORLQ8N3X6 602 aa19.23■□□□□ 0.67
SRGAP2C-201ENST00000304465 WDR18Q9BV38 432 aa19.23■□□□□ 0.67
SRGAP2C-201ENST00000304465 ARMT1Q9H993 441 aa19.23■□□□□ 0.67
SRGAP2C-201ENST00000304465 ZBTB21Q9ULJ3 1066 aa19.23■□□□□ 0.67
SRGAP2C-201ENST00000304465 MBD4O95243 580 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 OSBPP22059 807 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 FCGRTP55899 365 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 CAP1Q01518 475 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 MTMR2Q13614 643 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 UBE3CQ15386 1083 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 CERKLQ49MI3 558 aaPredicted RBP19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 TREML2Q5T2D2 321 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 AMOTL1Q8IY63 956 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 SDR42E1Q8WUS8 393 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 CABP5Q9NP86 173 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 PTCH2Q9Y6C5 1203 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 ADGRA2Q96PE1 1338 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 C19orf81C9J6K1 198 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 USP17L10C9JJH3 530 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 ERC2O15083 957 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 CDC45O75419 566 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 GH2P01242 217 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 BACE1P56817 501 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 SH3D19Q5HYK7 790 aa19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 RBM19Q9Y4C8 960 aaKnown RBP19.22■□□□□ 0.67
SRGAP2C-201ENST00000304465 CDK5RAP2Q96SN8 1893 aa19.21■□□□□ 0.67
SRGAP2C-201ENST00000304465 BCRP11274 1271 aa19.21■□□□□ 0.67
SRGAP2C-201ENST00000304465 PLCD1P51178 756 aa19.21■□□□□ 0.67
SRGAP2C-201ENST00000304465 TATDN1Q6P1N9 297 aa19.21■□□□□ 0.67
SRGAP2C-201ENST00000304465 FEZ1Q99689 392 aa19.21■□□□□ 0.67
SRGAP2C-201ENST00000304465 DCP1AQ9NPI6 582 aaPredicted RBP19.21■□□□□ 0.67
SRGAP2C-201ENST00000304465 ATP8A2Q9NTI2 1148 aa19.21■□□□□ 0.67
SRGAP2C-201ENST00000304465 IRX3P78415 501 aaPredicted RBP19.2■□□□□ 0.66
SRGAP2C-201ENST00000304465 JAG1P78504 1218 aa19.2■□□□□ 0.66
SRGAP2C-201ENST00000304465 RAB3GAP1Q15042 981 aa19.2■□□□□ 0.66
SRGAP2C-201ENST00000304465 ABCB5Q2M3G0 1257 aa19.2■□□□□ 0.66
SRGAP2C-201ENST00000304465 LRRFIP1Q32MZ4 808 aaKnown RBP19.2■□□□□ 0.66
SRGAP2C-201ENST00000304465 RAET1EQ8TD07 263 aa19.2■□□□□ 0.66
SRGAP2C-201ENST00000304465 ARMC5Q96C12 935 aa19.2■□□□□ 0.66
SRGAP2C-201ENST00000304465 TRIM47Q96LD4 638 aa19.2■□□□□ 0.66
SRGAP2C-201ENST00000304465 MYH1P12882 1939 aa19.19■□□□□ 0.66
SRGAP2C-201ENST00000304465 SLFNL1Q499Z3 407 aa19.19■□□□□ 0.66
SRGAP2C-201ENST00000304465 ANKRD13CQ8N6S4 541 aa19.19■□□□□ 0.66
SRGAP2C-201ENST00000304465 TMEM106CQ9BVX2 250 aa19.19■□□□□ 0.66
SRGAP2C-201ENST00000304465 SRRDQ9UH36 339 aa19.19■□□□□ 0.66
SRGAP2C-201ENST00000304465 SIPA1L1O43166 1804 aa19.19■□□□□ 0.66
SRGAP2C-201ENST00000304465 PHIPQ8WWQ0 1821 aa19.19■□□□□ 0.66
SRGAP2C-201ENST00000304465 GCLCP48506 637 aaPredicted RBP19.18■□□□□ 0.66
SRGAP2C-201ENST00000304465 SHROOM1Q2M3G4 852 aaPredicted RBP19.18■□□□□ 0.66
SRGAP2C-201ENST00000304465 KBTBD3Q8NAB2 608 aa19.18■□□□□ 0.66
SRGAP2C-201ENST00000304465 SLC4A4Q9Y6R1 1079 aa19.18■□□□□ 0.66
SRGAP2C-201ENST00000304465 ATAD5Q96QE3 1844 aa19.18■□□□□ 0.66
SRGAP2C-201ENST00000304465 MYPNQ86TC9 1320 aa19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 TRIM6-TRIM34B2RNG4 842 aa19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 MPHOSPH10O00566 681 aaKnown RBP19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 PRKAB2O43741 272 aa19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 USP17L2Q6R6M4 530 aa19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 RILPL2Q969X0 211 aa19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 ASCC2Q9H1I8 757 aaPredicted RBP19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 SWAP70Q9UH65 585 aa19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 TAOK2Q9UL54 1235 aa19.17■□□□□ 0.66
SRGAP2C-201ENST00000304465 TNPO2O14787 897 aaKnown RBP19.16■□□□□ 0.66
SRGAP2C-201ENST00000304465 ZFYP08048 801 aaPredicted RBP19.16■□□□□ 0.66
SRGAP2C-201ENST00000304465 CHMLP26374 656 aa19.16■□□□□ 0.66
SRGAP2C-201ENST00000304465 CTGFP29279 349 aa19.16■□□□□ 0.66
SRGAP2C-201ENST00000304465 SHMT1P34896 483 aa19.16■□□□□ 0.66
SRGAP2C-201ENST00000304465 FAM110CQ1W6H9 321 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms