RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 APBB1O00213 710 aa20.22■□□□□ 0.83
TRAPPC1-201ENST00000303731 TNPO2O14787 897 aaKnown RBP20.22■□□□□ 0.83
TRAPPC1-201ENST00000303731 PRKCZQ05513 592 aa20.22■□□□□ 0.83
TRAPPC1-201ENST00000303731 NKX2-3Q8TAU0 364 aa20.22■□□□□ 0.83
TRAPPC1-201ENST00000303731 COA7Q96BR5 231 aa20.22■□□□□ 0.83
TRAPPC1-201ENST00000303731 SERPINB13Q9UIV8 391 aa20.22■□□□□ 0.83
TRAPPC1-201ENST00000303731 ZBTB21Q9ULJ3 1066 aa20.22■□□□□ 0.83
TRAPPC1-201ENST00000303731 MAGEB6P1A0A0J9YX57 407 aa20.21■□□□□ 0.83
TRAPPC1-201ENST00000303731 USP17L10C9JJH3 530 aa20.21■□□□□ 0.83
TRAPPC1-201ENST00000303731 ECM2O94769 699 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC1-201ENST00000303731 MTMR2Q13614 643 aa20.21■□□□□ 0.83
TRAPPC1-201ENST00000303731 SLC9C2Q5TAH2 1124 aa20.21■□□□□ 0.83
TRAPPC1-201ENST00000303731 ANKRD13CQ8N6S4 541 aa20.21■□□□□ 0.83
TRAPPC1-201ENST00000303731 RIOK1Q9BRS2 568 aaKnown RBP20.21■□□□□ 0.83
TRAPPC1-201ENST00000303731 CRNKL1Q9BZJ0 848 aaKnown RBP20.21■□□□□ 0.83
TRAPPC1-201ENST00000303731 PDE6AP16499 860 aa20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 CAPN2P17655 700 aa20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 HOXA7P31268 230 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 IRX3P78415 501 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 IRF5Q13568 498 aa20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 TATDN1Q6P1N9 297 aa20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 PXYLP1Q8TE99 480 aa20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 DNAJC2Q99543 621 aaKnown RBP20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 ASCC2Q9H1I8 757 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 TAOK2Q9UL54 1235 aa20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 NAV1Q8NEY1 1877 aa20.2■□□□□ 0.82
TRAPPC1-201ENST00000303731 DDX60LQ5H9U9 1706 aaKnown RBP20.19■□□□□ 0.82
TRAPPC1-201ENST00000303731 GOLIM4O00461 696 aa20.19■□□□□ 0.82
TRAPPC1-201ENST00000303731 GDF11O95390 407 aa20.19■□□□□ 0.82
TRAPPC1-201ENST00000303731 GTF3C2Q8WUA4 911 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC1-201ENST00000303731 GCC1Q96CN9 775 aa20.19■□□□□ 0.82
TRAPPC1-201ENST00000303731 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.19■□□□□ 0.82
TRAPPC1-201ENST00000303731 BIN2Q9UBW5 565 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC1-201ENST00000303731 ATP5JP18859 108 aa20.18■□□□□ 0.82
TRAPPC1-201ENST00000303731 FLT3LGP49771 235 aa20.18■□□□□ 0.82
TRAPPC1-201ENST00000303731 LRRCC1Q9C099 1032 aa20.18■□□□□ 0.82
TRAPPC1-201ENST00000303731 PAG1Q9NWQ8 432 aa20.18■□□□□ 0.82
TRAPPC1-201ENST00000303731 ZNF532Q9HCE3 1301 aa20.18■□□□□ 0.82
TRAPPC1-201ENST00000303731 ADCY3O60266 1144 aa20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 SLC34A2O95436 690 aa20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 MYCP01106 439 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 GJB1P08034 283 aa20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 CERKLQ49MI3 558 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 USP17L2Q6R6M4 530 aa20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 CABP5Q9NP86 173 aa20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 MORF4L1Q9UBU8 362 aa20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 GABRQQ9UN88 632 aa20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 DOCK3Q8IZD9 2030 aa20.17■□□□□ 0.82
TRAPPC1-201ENST00000303731 GH2P01242 217 aa20.16■□□□□ 0.82
TRAPPC1-201ENST00000303731 POLR3DP05423 398 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC1-201ENST00000303731 CCL5P13501 91 aa20.16■□□□□ 0.82
TRAPPC1-201ENST00000303731 USP14P54578 494 aa20.16■□□□□ 0.82
TRAPPC1-201ENST00000303731 JAG1P78504 1218 aa20.16■□□□□ 0.82
TRAPPC1-201ENST00000303731 MTFR1Q15390 333 aa20.16■□□□□ 0.82
TRAPPC1-201ENST00000303731 MYH7P12883 1935 aa20.15■□□□□ 0.82
TRAPPC1-201ENST00000303731 TCRBV5S4A2TA0A5A2 114 aa20.15■□□□□ 0.82
TRAPPC1-201ENST00000303731 GJA8P48165 433 aa20.15■□□□□ 0.82
TRAPPC1-201ENST00000303731 ABCB5Q2M3G0 1257 aa20.15■□□□□ 0.82
TRAPPC1-201ENST00000303731 C20orf194Q5TEA3 1177 aa20.15■□□□□ 0.82
TRAPPC1-201ENST00000303731 C12orf42Q96LP6 360 aa20.15■□□□□ 0.82
TRAPPC1-201ENST00000303731 HAUS7Q99871 368 aa20.15■□□□□ 0.82
TRAPPC1-201ENST00000303731 RNF208Q9H0X6 261 aa20.15■□□□□ 0.82
TRAPPC1-201ENST00000303731 HERVK_113P62684 666 aa20.14■□□□□ 0.81
TRAPPC1-201ENST00000303731 ZSCAN25Q6NSZ9 544 aa20.14■□□□□ 0.81
TRAPPC1-201ENST00000303731 FEZ1Q99689 392 aa20.14■□□□□ 0.81
TRAPPC1-201ENST00000303731 BOLA2Q9H3K6 86 aa20.14■□□□□ 0.81
TRAPPC1-201ENST00000303731 MCM9Q9NXL9 1143 aa20.14■□□□□ 0.81
TRAPPC1-201ENST00000303731 ADD2P35612 726 aa20.13■□□□□ 0.81
TRAPPC1-201ENST00000303731 PLCD1P51178 756 aa20.13■□□□□ 0.81
TRAPPC1-201ENST00000303731 RAB3GAP1Q15042 981 aa20.13■□□□□ 0.81
TRAPPC1-201ENST00000303731 GPRC5AQ8NFJ5 357 aa20.13■□□□□ 0.81
TRAPPC1-201ENST00000303731 BCL11AQ9H165 835 aa20.13■□□□□ 0.81
TRAPPC1-201ENST00000303731 ATP8A2Q9NTI2 1148 aa20.13■□□□□ 0.81
TRAPPC1-201ENST00000303731 INHAP05111 366 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 SHMT1P34896 483 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 GABPAQ06546 454 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 UBE3CQ15386 1083 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 SHROOM1Q2M3G4 852 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 AMOTL1Q8IY63 956 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 P2RX7Q99572 595 aaKnown RBP20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 KIAA1683Q9H0B3 1180 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 DCP1AQ9NPI6 582 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 EMILIN3Q9NT22 766 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 SWAP70Q9UH65 585 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 MYH8P13535 1937 aa20.12■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L15C9J2P7 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L13C9JLJ4 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L11C9JVI0 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L18D6R9N7 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L22D6RA61 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L17D6RBQ6 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L19D6RCP7 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L20D6RJB6 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 ELNP15502 786 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 MAPK4P31152 587 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 USP17L24Q0WX57 530 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 LCORLQ8N3X6 602 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 SHISA4Q96DD7 197 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 GPATCH3Q96I76 525 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms