RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 CNNM3Q8NE01 707 aa21.47■■□□□ 1.03
RNF139-201ENST00000303545 MYRIPQ8NFW9 859 aa21.47■■□□□ 1.03
RNF139-201ENST00000303545 XPO4Q9C0E2 1151 aaKnown RBP21.47■■□□□ 1.03
RNF139-201ENST00000303545 MYH6P13533 1939 aa21.47■■□□□ 1.03
RNF139-201ENST00000303545 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
RNF139-201ENST00000303545 AKAP17AQ02040 695 aaKnown RBP21.47■■□□□ 1.03
RNF139-201ENST00000303545 HSP90AA4PQ58FG1 418 aa21.47■■□□□ 1.03
RNF139-201ENST00000303545 FOXP4Q8IVH2 680 aaPredicted RBP21.47■■□□□ 1.03
RNF139-201ENST00000303545 ANKIB1Q9P2G1 1089 aa21.47■■□□□ 1.03
RNF139-201ENST00000303545 BTAF1O14981 1849 aa21.47■■□□□ 1.03
RNF139-201ENST00000303545 CUTAO60888 179 aa21.46■■□□□ 1.03
RNF139-201ENST00000303545 ATP1A3P13637 1013 aa21.46■■□□□ 1.03
RNF139-201ENST00000303545 TM4SF1P30408 202 aa21.46■■□□□ 1.03
RNF139-201ENST00000303545 USP49Q70CQ1 688 aa21.46■■□□□ 1.03
RNF139-201ENST00000303545 BRIP1Q9BX63 1249 aa21.46■■□□□ 1.03
RNF139-201ENST00000303545 USP27XA6NNY8 438 aa21.46■■□□□ 1.03
RNF139-201ENST00000303545 CATIPQ7Z7H3 387 aa21.46■■□□□ 1.03
RNF139-201ENST00000303545 DCP1AQ9NPI6 582 aaPredicted RBP21.46■■□□□ 1.03
RNF139-201ENST00000303545 NCAPHQ15003 741 aa21.45■■□□□ 1.02
RNF139-201ENST00000303545 PKN1Q16512 942 aa21.45■■□□□ 1.02
RNF139-201ENST00000303545 DUOX1Q9NRD9 1551 aa21.45■■□□□ 1.02
RNF139-201ENST00000303545 RFC4P35249 363 aa21.45■■□□□ 1.02
RNF139-201ENST00000303545 RBM6P78332 1123 aaKnown RBP21.45■■□□□ 1.02
RNF139-201ENST00000303545 IQCA1Q86XH1 822 aa21.45■■□□□ 1.02
RNF139-201ENST00000303545 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.45■■□□□ 1.02
RNF139-201ENST00000303545 NID2Q14112 1375 aa21.45■■□□□ 1.02
RNF139-201ENST00000303545 POLR2DO15514 142 aaKnown RBP21.44■■□□□ 1.02
RNF139-201ENST00000303545 USP17L8P0C7I0 530 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 NFIXQ14938 502 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 KRBA2Q6ZNG9 492 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 FOXP1Q9H334 677 aaPredicted RBP21.44■■□□□ 1.02
RNF139-201ENST00000303545 MTMR7Q9Y216 660 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 WNT7AO00755 349 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 SKILP12757 684 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 GRIK5Q16478 980 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 TPD52L1Q16890 204 aaPredicted RBP21.44■■□□□ 1.02
RNF139-201ENST00000303545 RC3H1Q5TC82 1133 aaKnown RBP21.44■■□□□ 1.02
RNF139-201ENST00000303545 TMC6Q7Z403 805 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 TRMT1Q9NXH9 659 aaKnown RBP21.44■■□□□ 1.02
RNF139-201ENST00000303545 FBXO2Q9UK22 296 aaPredicted RBP21.44■■□□□ 1.02
RNF139-201ENST00000303545 PCDHA5Q9Y5H7 936 aa21.44■■□□□ 1.02
RNF139-201ENST00000303545 DYNC1I1O14576 645 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 RIOK3O14730 519 aaKnown RBP21.43■■□□□ 1.02
RNF139-201ENST00000303545 PRR29P0C7W0 189 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 DZIP1Q86YF9 867 aaKnown RBP21.43■■□□□ 1.02
RNF139-201ENST00000303545 CRNKL1Q9BZJ0 848 aaKnown RBP21.43■■□□□ 1.02
RNF139-201ENST00000303545 ANKRD2Q9GZV1 360 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 VEGFAP15692 232 aaPredicted RBP21.43■■□□□ 1.02
RNF139-201ENST00000303545 ZNF827Q17R98 1081 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 FAM196AQ6ZSG2 479 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 PRIMPOLQ96LW4 560 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 TIGD1Q96MW7 591 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 MCM9Q9NXL9 1143 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 SERTAD1Q9UHV2 236 aa21.43■■□□□ 1.02
RNF139-201ENST00000303545 RRP9O43818 475 aaKnown RBP21.42■■□□□ 1.02
RNF139-201ENST00000303545 TROAPQ12815 778 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 DIXDC1Q155Q3 683 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 FUT2Q10981 343 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 RILPL1Q5EBL4 403 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 ZNF592Q92610 1267 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 DYNLL2Q96FJ2 89 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 RNF26Q9BY78 433 aaPredicted RBP21.42■■□□□ 1.02
RNF139-201ENST00000303545 TUBE1Q9UJT0 475 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 GOLGB1Q14789 3259 aaKnown RBP21.42■■□□□ 1.02
RNF139-201ENST00000303545 PDE4BQ07343 736 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 CSRNP2Q9H175 543 aa21.42■■□□□ 1.02
RNF139-201ENST00000303545 ADAMTS3O15072 1205 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 BMP6P22004 513 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 SRBD1Q8N5C6 995 aaKnown RBP21.41■■□□□ 1.02
RNF139-201ENST00000303545 RGS22Q8NE09 1264 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 DPF2Q92785 391 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 BPIFA3Q9BQP9 254 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 HSD3B7Q9H2F3 369 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 TNRC6CQ9HCJ0 1690 aaKnown RBP21.41■■□□□ 1.02
RNF139-201ENST00000303545 TSPY2A6NKD2 308 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 TNNT1P13805 278 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 TRAPPC3LQ5T215 181 aa21.41■■□□□ 1.02
RNF139-201ENST00000303545 PTPREP23469 700 aa21.4■■□□□ 1.02
RNF139-201ENST00000303545 CCZ1BP86790 482 aa21.4■■□□□ 1.02
RNF139-201ENST00000303545 CCZ1P86791 482 aaPredicted RBP21.4■■□□□ 1.02
RNF139-201ENST00000303545 MTA3Q9BTC8 594 aa21.4■■□□□ 1.02
RNF139-201ENST00000303545 SEMA3EO15041 775 aa21.4■■□□□ 1.02
RNF139-201ENST00000303545 FANCCQ00597 558 aa21.4■■□□□ 1.02
RNF139-201ENST00000303545 ZNF174Q15697 407 aa21.4■■□□□ 1.02
RNF139-201ENST00000303545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.4■■□□□ 1.02
RNF139-201ENST00000303545 FAM237AA0A1B0GTK4 181 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 KRT2P35908 639 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 GLIPR1L2Q4G1C9 344 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 SH3RF3Q8TEJ3 882 aaPredicted RBP21.39■■□□□ 1.01
RNF139-201ENST00000303545 EPSTI1Q96J88 318 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 PHF20Q9BVI0 1012 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 SMTNL1A8MU46 457 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 CASP1P29466 404 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 TPM4P67936 248 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 FNBP4Q8N3X1 1017 aaPredicted RBP21.39■■□□□ 1.01
RNF139-201ENST00000303545 LRRC4BQ9NT99 713 aa21.39■■□□□ 1.01
RNF139-201ENST00000303545 PRPF3O43395 683 aaKnown RBP21.38■■□□□ 1.01
RNF139-201ENST00000303545 USP5P45974 858 aa21.38■■□□□ 1.01
RNF139-201ENST00000303545 GOLGA8FQ08AF8 430 aa21.38■■□□□ 1.01
RNF139-201ENST00000303545 GOLGA8DPQ0D2H9 430 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms