RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 DOCK1Q14185 1865 aa29.04■■■□□ 2.24
HOXC9-201ENST00000303450 MPHOSPH10O00566 681 aaKnown RBP29.04■■■□□ 2.24
HOXC9-201ENST00000303450 ASNSP08243 561 aa29.04■■■□□ 2.24
HOXC9-201ENST00000303450 AKNAD1Q5T1N1 836 aa29.04■■■□□ 2.24
HOXC9-201ENST00000303450 MFSD6Q6ZSS7 791 aa29.04■■■□□ 2.24
HOXC9-201ENST00000303450 ZNF444Q8N0Y2 327 aaPredicted RBP29.04■■■□□ 2.24
HOXC9-201ENST00000303450 NBPF3Q9H094 633 aa29.04■■■□□ 2.24
HOXC9-201ENST00000303450 RNF41Q9H4P4 317 aaPredicted RBP29.04■■■□□ 2.24
HOXC9-201ENST00000303450 CABP5Q9NP86 173 aa29.04■■■□□ 2.24
HOXC9-201ENST00000303450 EIF5BO60841 1220 aaKnown RBP29.03■■■□□ 2.24
HOXC9-201ENST00000303450 TBC1D10CQ8IV04 446 aa29.03■■■□□ 2.24
HOXC9-201ENST00000303450 INCENPQ9NQS7 918 aa29.03■■■□□ 2.24
HOXC9-201ENST00000303450 TOMM22Q9NS69 142 aa29.03■■■□□ 2.24
HOXC9-201ENST00000303450 GINM1Q9NU53 330 aa29.03■■■□□ 2.24
HOXC9-201ENST00000303450 ATAD5Q96QE3 1844 aa29.02■■■□□ 2.24
HOXC9-201ENST00000303450 GH2P01242 217 aa29.02■■■□□ 2.24
HOXC9-201ENST00000303450 CYP21A2P08686 494 aa29.02■■■□□ 2.24
HOXC9-201ENST00000303450 RASA1P20936 1047 aa29.02■■■□□ 2.24
HOXC9-201ENST00000303450 ERO1BQ86YB8 467 aa29.02■■■□□ 2.24
HOXC9-201ENST00000303450 STAG1Q8WVM7 1258 aa29.02■■■□□ 2.24
HOXC9-201ENST00000303450 CCDC102AQ96A19 550 aa29.02■■■□□ 2.24
HOXC9-201ENST00000303450 ZBTB21Q9ULJ3 1066 aa29.02■■■□□ 2.24
HOXC9-201ENST00000303450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.02■■■□□ 2.241e-7■■■■□ 24.6
HOXC9-201ENST00000303450 PCP11498 1178 aaKnown RBP29.01■■■□□ 2.23
HOXC9-201ENST00000303450 AKR1B1P15121 316 aa29.01■■■□□ 2.23
HOXC9-201ENST00000303450 JAG1P78504 1218 aa29.01■■■□□ 2.23
HOXC9-201ENST00000303450 GRM1Q13255 1194 aa29.01■■■□□ 2.23
HOXC9-201ENST00000303450 SHROOM1Q2M3G4 852 aaPredicted RBP29.01■■■□□ 2.23
HOXC9-201ENST00000303450 OPTNQ96CV9 577 aa29.01■■■□□ 2.23
HOXC9-201ENST00000303450 SPDYE5A6NIY4 337 aa29■■■□□ 2.23
HOXC9-201ENST00000303450 FGRP09769 529 aa29■■■□□ 2.23
HOXC9-201ENST00000303450 PTPRAP18433 802 aa29■■■□□ 2.23
HOXC9-201ENST00000303450 NECTIN1Q15223 517 aa29■■■□□ 2.23
HOXC9-201ENST00000303450 C8orf34Q49A92 452 aa29■■■□□ 2.23
HOXC9-201ENST00000303450 CYP4F22Q6NT55 531 aa29■■■□□ 2.23
HOXC9-201ENST00000303450 RASAL3Q86YV0 1011 aa29■■■□□ 2.23
HOXC9-201ENST00000303450 FRMD4AQ9P2Q2 1039 aaPredicted RBP29■■■□□ 2.23
HOXC9-201ENST00000303450 TACC3Q9Y6A5 838 aa29■■■□□ 2.23
HOXC9-201ENST00000303450 ORC4O43929 436 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 RAB3GAP1Q15042 981 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 RRP12Q5JTH9 1297 aaKnown RBP28.99■■■□□ 2.23
HOXC9-201ENST00000303450 RNF20Q5VTR2 975 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 CREB3L3Q68CJ9 461 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 CNKSR2Q8WXI2 1034 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 OTUD5Q96G74 571 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 ECE1P42892 770 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 PPATQ06203 517 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 TMEM179Q6ZVK1 233 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 WNK4Q96J92 1243 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 CAPNS2Q96L46 248 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 ZHX2Q9Y6X8 837 aa28.99■■■□□ 2.23
HOXC9-201ENST00000303450 USP17L5A8MUK1 530 aa28.98■■■□□ 2.23
HOXC9-201ENST00000303450 SLC27A2O14975 620 aa28.98■■■□□ 2.23
HOXC9-201ENST00000303450 EPB41L2O43491 1005 aaKnown RBP28.98■■■□□ 2.23
HOXC9-201ENST00000303450 RANBP6O60518 1105 aaKnown RBP28.98■■■□□ 2.23
HOXC9-201ENST00000303450 SLC10A3P09131 477 aa28.98■■■□□ 2.23
HOXC9-201ENST00000303450 SPRYD7Q5W111 196 aa28.98■■■□□ 2.23
HOXC9-201ENST00000303450 TSPY3P0CV98 308 aa28.97■■■□□ 2.23
HOXC9-201ENST00000303450 TSPY8P0CW00 308 aa28.97■■■□□ 2.23
HOXC9-201ENST00000303450 MKRN3Q13064 507 aaKnown RBP28.97■■■□□ 2.23
HOXC9-201ENST00000303450 CCDC84Q86UT8 332 aaPredicted RBP28.97■■■□□ 2.23
HOXC9-201ENST00000303450 NEDD4P46934 1319 aa28.96■■■□□ 2.23
HOXC9-201ENST00000303450 TSPY2A6NKD2 308 aa28.96■■■□□ 2.23
HOXC9-201ENST00000303450 ZBTB48P10074 688 aaPredicted RBP28.96■■■□□ 2.23
HOXC9-201ENST00000303450 TFAP4Q01664 338 aa28.96■■■□□ 2.23
HOXC9-201ENST00000303450 PPIL2Q13356 520 aa28.96■■■□□ 2.23
HOXC9-201ENST00000303450 SEPT2Q15019 361 aa28.96■■■□□ 2.23
HOXC9-201ENST00000303450 FAM47AQ5JRC9 791 aa28.96■■■□□ 2.23
HOXC9-201ENST00000303450 CNNM2Q9H8M5 875 aa28.96■■■□□ 2.23
HOXC9-201ENST00000303450 AS3MTQ9HBK9 375 aa28.96■■■□□ 2.23
HOXC9-201ENST00000303450 FAM155AB1AL88 458 aaPredicted RBP28.95■■■□□ 2.23
HOXC9-201ENST00000303450 TRDNQ13061 729 aa28.95■■■□□ 2.23
HOXC9-201ENST00000303450 USP26Q9BXU7 913 aa28.95■■■□□ 2.23
HOXC9-201ENST00000303450 TBC1D2Q9BYX2 928 aa28.95■■■□□ 2.23
HOXC9-201ENST00000303450 KRT23Q9C075 422 aa28.95■■■□□ 2.23
HOXC9-201ENST00000303450 E7EWF7 191 aa28.94■■■□□ 2.22
HOXC9-201ENST00000303450 GUCY1A2P33402 732 aa28.94■■■□□ 2.22
HOXC9-201ENST00000303450 GJA5P36382 358 aa28.94■■■□□ 2.22
HOXC9-201ENST00000303450 ESR2Q92731 530 aa28.94■■■□□ 2.22
HOXC9-201ENST00000303450 TAF6LQ9Y6J9 622 aa28.94■■■□□ 2.22
HOXC9-201ENST00000303450 WDR33Q9C0J8 1336 aaKnown RBP28.94■■■□□ 2.22
HOXC9-201ENST00000303450 IRF6O14896 467 aa28.94■■■□□ 2.22
HOXC9-201ENST00000303450 ZKSCAN1P17029 563 aaPredicted RBP28.94■■■□□ 2.22
HOXC9-201ENST00000303450 VEGFBP49765 207 aa28.94■■■□□ 2.22
HOXC9-201ENST00000303450 NEDD1Q8NHV4 660 aa28.94■■■□□ 2.22
HOXC9-201ENST00000303450 HSPA4P34932 840 aa28.93■■■□□ 2.22
HOXC9-201ENST00000303450 NT5C2P49902 561 aa28.93■■■□□ 2.22
HOXC9-201ENST00000303450 NOGQ13253 232 aa28.93■■■□□ 2.22
HOXC9-201ENST00000303450 ZNF280CQ8ND82 737 aa28.93■■■□□ 2.22
HOXC9-201ENST00000303450 KANSL2Q9H9L4 492 aa28.93■■■□□ 2.22
HOXC9-201ENST00000303450 AFG3L2Q9Y4W6 797 aa28.93■■■□□ 2.22
HOXC9-201ENST00000303450 B4E1Z4 1266 aa28.92■■■□□ 2.22
HOXC9-201ENST00000303450 SEC24BO95487 1268 aa28.92■■■□□ 2.22
HOXC9-201ENST00000303450 MCCP23508 829 aa28.92■■■□□ 2.22
HOXC9-201ENST00000303450 RALYLQ86SE5 291 aaKnown RBP28.92■■■□□ 2.22
HOXC9-201ENST00000303450 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.92■■■□□ 2.22
HOXC9-201ENST00000303450 PHIPQ8WWQ0 1821 aa28.92■■■□□ 2.22
HOXC9-201ENST00000303450 TRIM75PA6NK02 468 aa28.91■■■□□ 2.22
HOXC9-201ENST00000303450 KDM4AO75164 1064 aa28.91■■■□□ 2.22
HOXC9-201ENST00000303450 ICA1Q05084 483 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms