RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 CT47A1Q5JQC4 288 aaPredicted RBP27.6■■■□□ 2.01
FOXA3-201ENST00000302177 SEPT12Q8IYM1 358 aa27.6■■■□□ 2.01
FOXA3-201ENST00000302177 KCNJ14Q9UNX9 436 aa27.6■■■□□ 2.01
FOXA3-201ENST00000302177 NIP7Q9Y221 180 aaKnown RBP eCLIP27.6■■■□□ 2.01
FOXA3-201ENST00000302177 ZKSCAN3Q9BRR0 538 aa27.6■■■□□ 2.01
FOXA3-201ENST00000302177 OGFRQ9NZT2 677 aa27.6■■■□□ 2.01
FOXA3-201ENST00000302177 LOC102724428A0A0B4J2F2 783 aa27.59■■■□□ 2.01
FOXA3-201ENST00000302177 MAGEB6P1A0A0J9YX57 407 aa27.59■■■□□ 2.01
FOXA3-201ENST00000302177 SIK1P57059 783 aa27.59■■■□□ 2.01
FOXA3-201ENST00000302177 CFAP100Q494V2 611 aa27.59■■■□□ 2.01
FOXA3-201ENST00000302177 FANCLQ9NW38 375 aa27.59■■■□□ 2.01
FOXA3-201ENST00000302177 ZNF215Q9UL58 517 aaPredicted RBP27.59■■■□□ 2.01
FOXA3-201ENST00000302177 UBE4AQ14139 1066 aa27.59■■■□□ 2.01
FOXA3-201ENST00000302177 MIGA1Q8NAN2 632 aa27.59■■■□□ 2.01
FOXA3-201ENST00000302177 ENOX1Q8TC92 643 aaKnown RBP27.59■■■□□ 2.01
FOXA3-201ENST00000302177 ZNF652Q9Y2D9 606 aa27.59■■■□□ 2.01
FOXA3-201ENST00000302177 ONECUT3O60422 494 aaPredicted RBP27.58■■■□□ 2.01
FOXA3-201ENST00000302177 BMP6P22004 513 aa27.58■■■□□ 2.01
FOXA3-201ENST00000302177 DPF2Q92785 391 aa27.58■■■□□ 2.01
FOXA3-201ENST00000302177 CCDC34Q96HJ3 373 aa27.58■■■□□ 2.01
FOXA3-201ENST00000302177 MAN1B1Q9UKM7 699 aa27.58■■■□□ 2.01
FOXA3-201ENST00000302177 TOP1P11387 765 aaKnown RBP27.57■■■□□ 2
FOXA3-201ENST00000302177 CBX1P83916 185 aa27.57■■■□□ 2
FOXA3-201ENST00000302177 CLEC4GQ6UXB4 293 aa27.57■■■□□ 2
FOXA3-201ENST00000302177 FGRP09769 529 aa27.57■■■□□ 2
FOXA3-201ENST00000302177 MORC3Q14149 939 aa27.57■■■□□ 2
FOXA3-201ENST00000302177 SPATA20Q8TB22 786 aa27.57■■■□□ 2
FOXA3-201ENST00000302177 SMARCE1Q969G3 411 aa27.57■■■□□ 2
FOXA3-201ENST00000302177 BRIP1Q9BX63 1249 aa27.57■■■□□ 2
FOXA3-201ENST00000302177 PCDHB6Q9Y5E3 794 aa27.57■■■□□ 2
FOXA3-201ENST00000302177 POLR2DO15514 142 aaKnown RBP27.56■■■□□ 2
FOXA3-201ENST00000302177 AKAP17AQ02040 695 aaKnown RBP27.56■■■□□ 2
FOXA3-201ENST00000302177 DDB1Q16531 1140 aa27.56■■■□□ 2
FOXA3-201ENST00000302177 ZNF397Q8NF99 534 aaPredicted RBP27.56■■■□□ 2
FOXA3-201ENST00000302177 NUP133Q8WUM0 1156 aa27.56■■■□□ 2
FOXA3-201ENST00000302177 RIOK1Q9BRS2 568 aaKnown RBP27.56■■■□□ 2
FOXA3-201ENST00000302177 RBM28Q9NW13 759 aaKnown RBP27.56■■■□□ 2
FOXA3-201ENST00000302177 TNKSO95271 1327 aa27.56■■■□□ 2
FOXA3-201ENST00000302177 PRPF3O43395 683 aaKnown RBP27.55■■■□□ 2
FOXA3-201ENST00000302177 BMP15O95972 392 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 CALM1P0DP23 149 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 CALM2P0DP24 149 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 CALM3P0DP25 149 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 SF3B3Q15393 1217 aaKnown RBP27.55■■■□□ 2
FOXA3-201ENST00000302177 CCDC93Q567U6 631 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 UTP14CQ5TAP6 766 aaKnown RBP27.55■■■□□ 2
FOXA3-201ENST00000302177 SERTAD1Q9UHV2 236 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 KAT6BQ8WYB5 2073 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 ZNF18P17022 549 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 ETF1P62495 437 aaKnown RBP27.55■■■□□ 2
FOXA3-201ENST00000302177 PDE4BQ07343 736 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 ZSCAN10Q96SZ4 725 aaPredicted RBP27.55■■■□□ 2
FOXA3-201ENST00000302177 AATFQ9NY61 560 aaKnown RBP eCLIP27.55■■■□□ 2
FOXA3-201ENST00000302177 TAOK2Q9UL54 1235 aa27.55■■■□□ 2
FOXA3-201ENST00000302177 PHLPP2Q6ZVD8 1323 aa27.54■■■□□ 2
FOXA3-201ENST00000302177 ERCC5P28715 1186 aaPredicted RBP27.54■■■□□ 2
FOXA3-201ENST00000302177 TBX2Q13207 712 aaPredicted RBP27.54■■■□□ 2
FOXA3-201ENST00000302177 NR5A1Q13285 461 aa27.54■■■□□ 2
FOXA3-201ENST00000302177 ITPK1Q13572 414 aa27.54■■■□□ 2
FOXA3-201ENST00000302177 NAA30Q147X3 362 aaPredicted RBP27.54■■■□□ 2
FOXA3-201ENST00000302177 ADGRA1Q86SQ6 560 aa27.54■■■□□ 2
FOXA3-201ENST00000302177 RAI14Q9P0K7 980 aa27.54■■■□□ 2
FOXA3-201ENST00000302177 MINDY4BA8MYZ0 360 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 RGL2O15211 777 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 FOXN1O15353 648 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 ANKRD18AQ8IVF6 992 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 PHF20Q9BVI0 1012 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 CABP5Q9NP86 173 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 BSDC1Q9NW68 430 aaPredicted RBP27.53■■■□□ 2
FOXA3-201ENST00000302177 DDX41Q9UJV9 622 aaKnown RBP27.53■■■□□ 2
FOXA3-201ENST00000302177 ACTN4O43707 911 aaKnown RBP27.53■■■□□ 2
FOXA3-201ENST00000302177 GRIN1Q05586 938 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 CAVIN4Q5BKX8 364 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 SPECC1Q5M775 1068 aa27.53■■■□□ 2
FOXA3-201ENST00000302177 TRIM75PA6NK02 468 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 SEMA3EO15041 775 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 ARHGAP6O43182 974 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 ZSCAN12O43309 604 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 ZSCAN20P17040 1043 aaPredicted RBP27.52■■■□□ 2
FOXA3-201ENST00000302177 FUT2Q10981 343 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 TMED8Q6PL24 325 aaPredicted RBP27.52■■■□□ 2
FOXA3-201ENST00000302177 SYT10Q6XYQ8 523 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 CATIPQ7Z7H3 387 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 CCDC82Q8N4S0 544 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 SDR42E1Q8WUS8 393 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 SMARCC1Q92922 1105 aaPredicted RBP27.52■■■□□ 2
FOXA3-201ENST00000302177 GTPBP4Q9BZE4 634 aaKnown RBP27.52■■■□□ 2
FOXA3-201ENST00000302177 ABCF2Q9UG63 623 aa27.52■■■□□ 2
FOXA3-201ENST00000302177 PKN1Q16512 942 aa27.51■■■□□ 2
FOXA3-201ENST00000302177 ENAHQ8N8S7 591 aaPredicted RBP27.51■■■□□ 2
FOXA3-201ENST00000302177 OXER1Q8TDS5 423 aa27.51■■■□□ 2
FOXA3-201ENST00000302177 EP400Q96L91 3159 aa27.51■■■□□ 2
FOXA3-201ENST00000302177 KRT2P35908 639 aa27.51■■□□□ 1.99
FOXA3-201ENST00000302177 BARGINQ6ZT62 677 aa27.51■■□□□ 1.99
FOXA3-201ENST00000302177 IQCA1Q86XH1 822 aa27.51■■□□□ 1.99
FOXA3-201ENST00000302177 FERMT2Q96AC1 680 aa27.51■■□□□ 1.99
FOXA3-201ENST00000302177 CSRNP2Q9H175 543 aa27.51■■□□□ 1.99
FOXA3-201ENST00000302177 FAM182BQ5T319 152 aa27.5■■□□□ 1.99
FOXA3-201ENST00000302177 CMTR1Q8N1G2 835 aaKnown RBP27.5■■□□□ 1.99
FOXA3-201ENST00000302177 NFE2L3Q9Y4A8 694 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms