RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 RABGAP1Q9Y3P9 1069 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 CRKP46108 304 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 IREB2P48200 963 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 EAPPQ56P03 285 aaPredicted RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 DGKHQ86XP1 1220 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 PDILTQ8N807 584 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 RNF214Q8ND24 703 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 OSBP2Q969R2 916 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 FAM84BQ96KN1 310 aaPredicted RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 SCLT1Q96NL6 688 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 HDLBPQ00341 1268 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 UVSSAQ2YD98 709 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 IQUBQ8NA54 791 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 NOC3LQ8WTT2 800 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 SEC62Q99442 399 aaKnown RBP9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 EXOC1Q9NV70 894 aa9.45□□□□□ -0.9
SNRPD1-201ENST00000300413 M0R2C6 588 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 DESP17661 470 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 FERMT2Q96AC1 680 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 RNF26Q9BY78 433 aaPredicted RBP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 ANTXR1Q9H6X2 564 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 RAD17O75943 681 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 PRKCSHP14314 528 aaPredicted RBP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 CFAP100Q494V2 611 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 LCORLQ8N3X6 602 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 STAG1Q8WVM7 1258 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 PDS5AQ29RF7 1337 aaKnown RBP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 CYP2E1P05181 493 aaPredicted RBP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 POTEJP0CG39 1038 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 MATR3P43243 847 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 TMEM179Q6ZVK1 233 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 FAM160B2Q86V87 743 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 DIS3L2Q8IYB7 885 aaKnown RBP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 CCDC150Q8NCX0 1101 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 LMO7Q8WWI1 1683 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 RFX5P48382 616 aaPredicted RBP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 SLFN13Q68D06 897 aa9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 FAM177A1Q8N128 213 aaPredicted RBP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 REXO1Q8N1G1 1221 aaKnown RBP9.44□□□□□ -0.9
SNRPD1-201ENST00000300413 ASNSP08243 561 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 RRAGBQ5VZM2 374 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 APBB1IPQ7Z5R6 666 aaPredicted RBP9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 SHPRHQ149N8 1683 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 CUTAO60888 179 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 YEATS4O95619 227 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 CYP21A2P08686 494 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 RDXP35241 583 aaKnown RBP9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 CCNA1P78396 465 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 R3HDM1Q15032 1099 aaKnown RBP9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 ODF2Q5BJF6 829 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 COL23A1Q86Y22 540 aaPredicted RBP9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 ZNF609O15014 1411 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 HHIPL2Q6UWX4 724 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 FBXO33Q7Z6M2 555 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 PUS7LQ9H0K6 701 aaKnown RBP9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 GRPEL1Q9HAV7 217 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 HERC5Q9UII4 1024 aaKnown RBP9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 KRT40Q6A162 431 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 NLRX1Q86UT6 975 aa9.43□□□□□ -0.9
SNRPD1-201ENST00000300413 ELP1O95163 1332 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 FDX1P10109 184 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 IDEP14735 1019 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 TRAPPC10P48553 1259 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 ANO1Q5XXA6 986 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 GINM1Q9NU53 330 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 SETD1AO15047 1707 aaKnown RBP9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 KLRF2D3W0D1 207 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 DYNLL1P63167 89 aaKnown RBP9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 NECTIN1Q15223 517 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 LTN1O94822 1766 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 SLIT2O94813 1529 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 PSMA7O14818 248 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 SCG2P13521 617 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 OSBPP22059 807 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 GNPTABQ3T906 1256 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 TTC38Q5R3I4 469 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 CTAGE1Q96RT6 745 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 BEGAINQ9BUH8 593 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 ZNF341Q9BYN7 854 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 PDCL3Q9H2J4 239 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 ZNF408Q9H9D4 720 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 SYCE3A1L190 88 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 ENTPD3O75355 529 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 CPA1P15085 419 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 RXRAP19793 462 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 AOC3Q16853 763 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 KRT26Q7Z3Y9 468 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 VPS36Q86VN1 386 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 FBXO11Q86XK2 927 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 CKAP2LQ8IYA6 745 aa9.42□□□□□ -0.9
SNRPD1-201ENST00000300413 NEMFO60524 1076 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 DNM1Q05193 864 aaKnown RBP9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 AGBL3Q8NEM8 1001 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 AMNQ9BXJ7 453 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 BICDL2A1A5D9 508 aa9.41□□□□□ -0.9
SNRPD1-201ENST00000300413 NCBP1Q09161 790 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms