RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 TMTC2Q8N394 836 aa16.5■□□□□ 0.23
CDH16-201ENST00000299752 ENAHQ8N8S7 591 aaPredicted RBP16.5■□□□□ 0.23
CDH16-201ENST00000299752 FBXO18Q8NFZ0 1043 aa16.5■□□□□ 0.23
CDH16-201ENST00000299752 CDK5RAP2Q96SN8 1893 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 FGRP09769 529 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 PTGER2P43116 358 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 APOBEC3HQ6NTF7 200 aaKnown RBP16.49■□□□□ 0.23
CDH16-201ENST00000299752 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 ZSCAN10Q96SZ4 725 aaPredicted RBP16.49■□□□□ 0.23
CDH16-201ENST00000299752 MTA3Q9BTC8 594 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 ELP1O95163 1332 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 IGSF3O75054 1194 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 TFAP4Q01664 338 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 SEC23AQ15436 765 aa16.49■□□□□ 0.23
CDH16-201ENST00000299752 FTOQ9C0B1 505 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDH16-201ENST00000299752 PSMD14O00487 310 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 PCP11498 1178 aaKnown RBP16.48■□□□□ 0.23
CDH16-201ENST00000299752 IARSP41252 1262 aaKnown RBP16.48■□□□□ 0.23
CDH16-201ENST00000299752 PDE4BQ07343 736 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 SBK1Q52WX2 424 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 CC2D2BQ6DHV5 1058 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 SUPT20HQ8NEM7 779 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 CFAP45Q9UL16 551 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
CDH16-201ENST00000299752 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.48■□□□□ 0.23
CDH16-201ENST00000299752 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 BAZ2BQ9UIF8 2168 aaKnown RBP16.48■□□□□ 0.23
CDH16-201ENST00000299752 DLEC1Q9Y238 1755 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 FAM196BA6NMK8 535 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 WDHD1O75717 1129 aaPredicted RBP16.48■□□□□ 0.23
CDH16-201ENST00000299752 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
CDH16-201ENST00000299752 TGFB2P61812 414 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 RTN1Q16799 776 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 AMOTL1Q8IY63 956 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
CDH16-201ENST00000299752 SGIP1Q9BQI5 828 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 ALG1Q9BT22 464 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 NAV1Q8NEY1 1877 aa16.48■□□□□ 0.23
CDH16-201ENST00000299752 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
CDH16-201ENST00000299752 RASSF7Q02833 373 aa16.47■□□□□ 0.23
CDH16-201ENST00000299752 LRSAM1Q6UWE0 723 aa16.47■□□□□ 0.23
CDH16-201ENST00000299752 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
CDH16-201ENST00000299752 GOLGA6L4A6NEF3 574 aa16.47■□□□□ 0.23
CDH16-201ENST00000299752 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
CDH16-201ENST00000299752 PIBF1Q8WXW3 757 aa16.47■□□□□ 0.23
CDH16-201ENST00000299752 TDRD3Q9H7E2 651 aaKnown RBP16.47■□□□□ 0.23
CDH16-201ENST00000299752 PLCG2P16885 1265 aa16.47■□□□□ 0.23
CDH16-201ENST00000299752 ORC4O43929 436 aa16.46■□□□□ 0.23
CDH16-201ENST00000299752 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.23
CDH16-201ENST00000299752 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
CDH16-201ENST00000299752 USP28Q96RU2 1077 aa16.46■□□□□ 0.23
CDH16-201ENST00000299752 LAMB1P07942 1786 aa16.46■□□□□ 0.23
CDH16-201ENST00000299752 MYH1P12882 1939 aa16.46■□□□□ 0.23
CDH16-201ENST00000299752 SHTN1A0MZ66 631 aa16.46■□□□□ 0.23
CDH16-201ENST00000299752 SSRP1Q08945 709 aaKnown RBP16.46■□□□□ 0.23
CDH16-201ENST00000299752 RASGRP2Q7LDG7 609 aa16.46■□□□□ 0.23
CDH16-201ENST00000299752 CLEC10AQ8IUN9 316 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 PSMD1Q99460 953 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 MYH15Q9Y2K3 1946 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 CLRN2A0PK11 232 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 NFKBIEO00221 500 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 IFNAR1P17181 557 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 CDK8P49336 464 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 ZSCAN29Q8IWY8 852 aaPredicted RBP16.45■□□□□ 0.22
CDH16-201ENST00000299752 NIM1KQ8IY84 436 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 ZNF444Q8N0Y2 327 aaPredicted RBP16.45■□□□□ 0.22
CDH16-201ENST00000299752 PRMT6Q96LA8 375 aaPredicted RBP16.45■□□□□ 0.22
CDH16-201ENST00000299752 RBSNQ9H1K0 784 aa16.45■□□□□ 0.22
CDH16-201ENST00000299752 KIF28PB7ZC32 967 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 LIG1P18858 919 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 CFAP100Q494V2 611 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 ZNF396Q96N95 335 aaPredicted RBP16.44■□□□□ 0.22
CDH16-201ENST00000299752 TAOK3Q9H2K8 898 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 IL17RBQ9NRM6 502 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 STX8Q9UNK0 236 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 SUGT1Q9Y2Z0 365 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 KIF13BQ9NQT8 1826 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 NID2Q14112 1375 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
CDH16-201ENST00000299752 GUCY1A2P33402 732 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
CDH16-201ENST00000299752 KRT40Q6A162 431 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 RASA1P20936 1047 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
CDH16-201ENST00000299752 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
CDH16-201ENST00000299752 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
CDH16-201ENST00000299752 NASPP49321 788 aaPredicted RBP16.43■□□□□ 0.22
CDH16-201ENST00000299752 RCAN1P53805 252 aa16.43■□□□□ 0.22
CDH16-201ENST00000299752 TRIM22Q8IYM9 498 aa16.43■□□□□ 0.22
CDH16-201ENST00000299752 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
CDH16-201ENST00000299752 BICD2Q8TD16 824 aa16.43■□□□□ 0.22
CDH16-201ENST00000299752 ZDHHC15Q96MV8 337 aa16.43■□□□□ 0.22
CDH16-201ENST00000299752 RCOR1Q9UKL0 485 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms