RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 MTMR6Q9Y217 621 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 ESPNB1AK53 854 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 SEMA3EO15041 775 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 NMT2O60551 498 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 KRT79Q5XKE5 535 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 USP17L2Q6R6M4 530 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 KCTD1Q719H9 257 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 BRIP1Q9BX63 1249 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 POLR2DO15514 142 aaKnown RBP11.58□□□□□ -0.55
GABRB3-201ENST00000299267 PFKFB2O60825 505 aa11.58□□□□□ -0.55
GABRB3-201ENST00000299267 BRD1O95696 1058 aa11.58□□□□□ -0.55
GABRB3-201ENST00000299267 CSF1RP07333 972 aa11.58□□□□□ -0.55
GABRB3-201ENST00000299267 XRCC6P12956 609 aaKnown RBP eCLIP11.58□□□□□ -0.55
GABRB3-201ENST00000299267 RC3H1Q5TC82 1133 aaKnown RBP11.58□□□□□ -0.55
GABRB3-201ENST00000299267 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.55
GABRB3-201ENST00000299267 TMC6Q7Z403 805 aa11.58□□□□□ -0.55
GABRB3-201ENST00000299267 TRIM47Q96LD4 638 aa11.58□□□□□ -0.55
GABRB3-201ENST00000299267 CBFA2T2O43439 604 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 TOP1P11387 765 aaKnown RBP11.58□□□□□ -0.56
GABRB3-201ENST00000299267 SFPQP23246 707 aaKnown RBP eCLIP11.58□□□□□ -0.56
GABRB3-201ENST00000299267 RFX5P48382 616 aaPredicted RBP11.58□□□□□ -0.56
GABRB3-201ENST00000299267 TYRO3Q06418 890 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 SYCP1Q15431 976 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 TBC1D10BQ4KMP7 808 aaPredicted RBP11.58□□□□□ -0.56
GABRB3-201ENST00000299267 LUZP1Q86V48 1076 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 SMCO2A6NFE2 343 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 AMPD3Q01432 767 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 SYCP3Q8IZU3 236 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 NEURL4Q96JN8 1562 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 SORBS3O60504 671 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
GABRB3-201ENST00000299267 TBC1D10CQ8IV04 446 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 COA1Q9GZY4 146 aa11.58□□□□□ -0.56
GABRB3-201ENST00000299267 ODF2Q5BJF6 829 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 TTC38Q5R3I4 469 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 MAEAQ7L5Y9 396 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 EXOC1Q9NV70 894 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
GABRB3-201ENST00000299267 TMEM232C9JQI7 657 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 ABCB5Q2M3G0 1257 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 CCDC40Q4G0X9 1142 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 WWC2Q6AWC2 1192 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 CC2D2BQ6DHV5 1058 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.57□□□□□ -0.56
GABRB3-201ENST00000299267 BMP15O95972 392 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 DNA2P51530 1060 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 MYSM1Q5VVJ2 828 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 TAOK3Q9H2K8 898 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 TAF6LQ9Y6J9 622 aa11.57□□□□□ -0.56
GABRB3-201ENST00000299267 WTIPA6NIX2 430 aaPredicted RBP11.56□□□□□ -0.56
GABRB3-201ENST00000299267 BACH1O14867 736 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 N4BP3O15049 544 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 ECE2O60344 883 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 INF2Q27J81 1249 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 SLFN13Q68D06 897 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 CERS3Q8IU89 383 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 SH2D4AQ9H788 454 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 TMOD4Q9NZQ9 345 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.56□□□□□ -0.56
GABRB3-201ENST00000299267 TBCAO75347 108 aaKnown RBP11.56□□□□□ -0.56
GABRB3-201ENST00000299267 SF3B3Q15393 1217 aaKnown RBP11.56□□□□□ -0.56
GABRB3-201ENST00000299267 TMC4Q7Z404 712 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 SULF1Q8IWU6 871 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 KCNH3Q9ULD8 1083 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 USP42Q9H9J4 1324 aaKnown RBP11.56□□□□□ -0.56
GABRB3-201ENST00000299267 ATP10DQ9P241 1426 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 USP32Q8NFA0 1604 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 ALAS1P13196 640 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 GYS1P13807 737 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 SNAP25P60880 206 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 CIAPIN1Q6FI81 312 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 CACNA2D4Q7Z3S7 1137 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 ERMNQ8TAM6 284 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 TBC1D16Q8TBP0 767 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 PGBD1Q96JS3 809 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 CLIC6Q96NY7 704 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 TSG101Q99816 390 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 LMBRD1Q9NUN5 540 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 KIF13AQ9H1H9 1805 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 USP8P40818 1118 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
GABRB3-201ENST00000299267 NR5A1Q13285 461 aa11.56□□□□□ -0.56
GABRB3-201ENST00000299267 NUP88Q99567 741 aaPredicted RBP11.56□□□□□ -0.56
GABRB3-201ENST00000299267 TNFAIP1Q13829 316 aa11.55□□□□□ -0.56
GABRB3-201ENST00000299267 KANK3Q6NY19 840 aa11.55□□□□□ -0.56
GABRB3-201ENST00000299267 REXO1Q8N1G1 1221 aaKnown RBP11.55□□□□□ -0.56
GABRB3-201ENST00000299267 NSUN7Q8NE18 718 aaKnown RBP11.55□□□□□ -0.56
GABRB3-201ENST00000299267 MED23Q9ULK4 1368 aa11.55□□□□□ -0.56
GABRB3-201ENST00000299267 ADCY7P51828 1080 aa11.55□□□□□ -0.56
GABRB3-201ENST00000299267 UBXN2AP68543 259 aa11.55□□□□□ -0.56
GABRB3-201ENST00000299267 TXNRD3Q86VQ6 643 aa11.55□□□□□ -0.56
GABRB3-201ENST00000299267 EPB41L2O43491 1005 aaKnown RBP11.55□□□□□ -0.56
GABRB3-201ENST00000299267 CRKP46108 304 aa11.55□□□□□ -0.56
GABRB3-201ENST00000299267 NONOQ15233 471 aaKnown RBP eCLIP11.55□□□□□ -0.56
GABRB3-201ENST00000299267 IQUBQ8NA54 791 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms