RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SCN9AQ15858 1988 aa29.82■■■□□ 2.36
SDCCAG3-201ENST00000298537 MKNK2Q9HBH9 465 aa29.82■■■□□ 2.36
SDCCAG3-201ENST00000298537 DDX4Q9NQI0 724 aaKnown RBP29.82■■■□□ 2.36
SDCCAG3-201ENST00000298537 SHISA4Q96DD7 197 aa29.81■■■□□ 2.36
SDCCAG3-201ENST00000298537 CFAP45Q9UL16 551 aa29.81■■■□□ 2.36
SDCCAG3-201ENST00000298537 KCNJ14Q9UNX9 436 aa29.81■■■□□ 2.36
SDCCAG3-201ENST00000298537 CLIC4Q9Y696 253 aa29.81■■■□□ 2.36
SDCCAG3-201ENST00000298537 ROBO3Q96MS0 1386 aa29.81■■■□□ 2.36
SDCCAG3-201ENST00000298537 ECE2O60344 883 aa29.8■■■□□ 2.36
SDCCAG3-201ENST00000298537 CCDC183Q5T5S1 534 aa29.8■■■□□ 2.36
SDCCAG3-201ENST00000298537 CATIPQ7Z7H3 387 aa29.8■■■□□ 2.36
SDCCAG3-201ENST00000298537 SNED1Q8TER0 1413 aa29.8■■■□□ 2.36
SDCCAG3-201ENST00000298537 KIAA0825Q8IV33 1275 aa29.8■■■□□ 2.36
SDCCAG3-201ENST00000298537 SYAP1Q96A49 352 aaPredicted RBP29.8■■■□□ 2.36
SDCCAG3-201ENST00000298537 SLF2Q8IX21 1173 aa29.79■■■□□ 2.36
SDCCAG3-201ENST00000298537 RCOR1Q9UKL0 485 aa29.79■■■□□ 2.36
SDCCAG3-201ENST00000298537 ISY1Q9ULR0 285 aaKnown RBP29.79■■■□□ 2.36
SDCCAG3-201ENST00000298537 STK36Q9NRP7 1315 aa29.79■■■□□ 2.36
SDCCAG3-201ENST00000298537 DLEC1Q9Y238 1755 aa29.79■■■□□ 2.36
SDCCAG3-201ENST00000298537 RASA1P20936 1047 aa29.79■■■□□ 2.36
SDCCAG3-201ENST00000298537 FUT2Q10981 343 aa29.79■■■□□ 2.36
SDCCAG3-201ENST00000298537 MYSM1Q5VVJ2 828 aa29.79■■■□□ 2.36
SDCCAG3-201ENST00000298537 DDX60LQ5H9U9 1706 aaKnown RBP29.78■■■□□ 2.36
SDCCAG3-201ENST00000298537 SLURP2P0DP57 97 aa29.78■■■□□ 2.36
SDCCAG3-201ENST00000298537 PODNQ7Z5L7 613 aa29.78■■■□□ 2.36
SDCCAG3-201ENST00000298537 C10orf71Q711Q0 1435 aa29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 GOLGA6L4A6NEF3 574 aa29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 WDHD1O75717 1129 aaPredicted RBP29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 PLCG2P16885 1265 aa29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 CDK8P49336 464 aa29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 RCAN1P53805 252 aa29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 CAMK4Q16566 473 aa29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 AMOTL1Q8IY63 956 aa29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 ZNF396Q96N95 335 aaPredicted RBP29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 DACT1Q9NYF0 836 aa29.77■■■□□ 2.36
SDCCAG3-201ENST00000298537 NR1I2O75469 434 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 DACT2Q5SW24 774 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 APOBEC3HQ6NTF7 200 aaKnown RBP29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 RASGRP2Q7LDG7 609 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 RNF214Q8ND24 703 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 BICD2Q8TD16 824 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 USP40Q9NVE5 1235 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 BAZ2BQ9UIF8 2168 aaKnown RBP29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 CCDC196A0A1B0GTZ2 297 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 ZBTB7AO95365 584 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 DPEP1P16444 411 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 KCNA3P22001 575 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 TRIM22Q8IYM9 498 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 SUGT1Q9Y2Z0 365 aa29.76■■■□□ 2.35
SDCCAG3-201ENST00000298537 TSPY3P0CV98 308 aa29.75■■■□□ 2.35
SDCCAG3-201ENST00000298537 TSPY8P0CW00 308 aa29.75■■■□□ 2.35
SDCCAG3-201ENST00000298537 PRKCSHP14314 528 aaPredicted RBP29.75■■■□□ 2.35
SDCCAG3-201ENST00000298537 CACNB3P54284 484 aa29.75■■■□□ 2.35
SDCCAG3-201ENST00000298537 PKN1Q16512 942 aa29.75■■■□□ 2.35
SDCCAG3-201ENST00000298537 CDC42EP5Q6NZY7 148 aa29.75■■■□□ 2.35
SDCCAG3-201ENST00000298537 MTMR7Q9Y216 660 aa29.75■■■□□ 2.35
SDCCAG3-201ENST00000298537 NFIAQ12857 509 aa29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 C16orf86Q6ZW13 317 aa29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 ZNF444Q8N0Y2 327 aaPredicted RBP29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 SRBD1Q8N5C6 995 aaKnown RBP29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 PIBF1Q8WXW3 757 aa29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 MYH1P12882 1939 aa29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 CERS3Q8IU89 383 aa29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 GOLPH3LQ9H4A5 285 aa29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 V9GY48 417 aaPredicted RBP29.74■■■□□ 2.35
SDCCAG3-201ENST00000298537 YDJCA8MPS7 323 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 BTBD18B2RXH4 712 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 DEXIO95424 95 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 RTEL1Q9NZ71 1219 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 DDAH1O94760 285 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 VEGFAP15692 232 aaPredicted RBP29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 CRKP46108 304 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 TMTC3Q6ZXV5 915 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 BRAPQ7Z569 592 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 LINC00301Q8NCQ3 95 aa29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.73■■■□□ 2.35
SDCCAG3-201ENST00000298537 NASPP49321 788 aaPredicted RBP29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 TRIM29Q14134 588 aa29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 ZFPM1Q8IX07 1006 aa29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 OXER1Q8TDS5 423 aa29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 TEKT1Q969V4 418 aa29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 VPS54Q9P1Q0 977 aa29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 KIAA2012Q0VF49 1180 aa29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 STRIP1Q5VSL9 837 aa29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 PCDHA7Q9UN72 937 aa29.72■■■□□ 2.35
SDCCAG3-201ENST00000298537 ME1P48163 572 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 STX8Q9UNK0 236 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 PPIP5K2O43314 1243 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 MMP1P03956 469 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 NR5A1Q13285 461 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 STAG2Q8N3U4 1231 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 TTLL6Q8N841 843 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 PNMA1Q8ND90 353 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 RNF26Q9BY78 433 aaPredicted RBP29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 KAT14Q9H8E8 782 aa29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 ATF5Q9Y2D1 282 aaPredicted RBP29.71■■■□□ 2.35
SDCCAG3-201ENST00000298537 U2AF2P26368 475 aaKnown RBP eCLIP29.7■■■□□ 2.358e-13■□□□□ 9.9
SDCCAG3-201ENST00000298537 GNL2Q13823 731 aaKnown RBP29.7■■■□□ 2.35
SDCCAG3-201ENST00000298537 DIS3L2Q8IYB7 885 aaKnown RBP29.7■■■□□ 2.35
SDCCAG3-201ENST00000298537 TSPY26PQ9H489 355 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms