RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 PDHXO00330 501 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 JAG1P78504 1218 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 GABPAQ06546 454 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 SHROOM1Q2M3G4 852 aaPredicted RBP14.4□□□□□ -0.1
CDK5-201ENST00000297518 IFFO2Q5TF58 517 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 GPAT2Q6NUI2 795 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 GADL1Q6ZQY3 521 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 AMOTL1Q8IY63 956 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 ZNF280CQ8ND82 737 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 STRBPQ96SI9 672 aaKnown RBP14.4□□□□□ -0.1
CDK5-201ENST00000297518 AS3MTQ9HBK9 375 aa14.4□□□□□ -0.1
CDK5-201ENST00000297518 MYH8P13535 1937 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 GPAA1O43292 621 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 CYP2D6P10635 497 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 SHMT1P34896 483 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 EVX2Q03828 476 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 SPP2Q13103 211 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 CERKLQ49MI3 558 aaPredicted RBP14.39□□□□□ -0.11
CDK5-201ENST00000297518 EVI5LQ96CN4 794 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
CDK5-201ENST00000297518 USP17L12C9JPN9 530 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 USP17L21D6R901 530 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 M0R2C6 588 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 TLR2O60603 784 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 GH2P01242 217 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 GNAT2P19087 354 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 SP3Q02447 781 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 ZMYM1Q5SVZ6 1142 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 C12orf60Q5U649 245 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 PLEKHM2Q8IWE5 1019 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 PROCA1Q8NCQ7 364 aaPredicted RBP14.38□□□□□ -0.11
CDK5-201ENST00000297518 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
CDK5-201ENST00000297518 CYP2D7A0A087X1C5 515 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 GSG1L2A8MUP6 293 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 HMGCS2P54868 508 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 ABCB5Q2M3G0 1257 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 SH3D19Q5HYK7 790 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 GIMAP6Q6P9H5 292 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 CTR9Q6PD62 1173 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 ABHD8Q96I13 439 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 SEC62Q99442 399 aaKnown RBP14.37□□□□□ -0.11
CDK5-201ENST00000297518 PARK7Q99497 189 aaKnown RBP14.37□□□□□ -0.11
CDK5-201ENST00000297518 OSBPL3Q9H4L5 887 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 CABP5Q9NP86 173 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 ARPP21Q9UBL0 812 aaPredicted RBP14.37□□□□□ -0.11
CDK5-201ENST00000297518 SWAP70Q9UH65 585 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 AGTPBP1Q9UPW5 1226 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 SLC45A1Q9Y2W3 748 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 ADGRA2Q96PE1 1338 aa14.37□□□□□ -0.11
CDK5-201ENST00000297518 TRIM6-TRIM34B2RNG4 842 aa14.36□□□□□ -0.11
CDK5-201ENST00000297518 BACE1P56817 501 aa14.36□□□□□ -0.11
CDK5-201ENST00000297518 MTMR2Q13614 643 aa14.36□□□□□ -0.11
CDK5-201ENST00000297518 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
CDK5-201ENST00000297518 SLC44A5Q8NCS7 719 aa14.36□□□□□ -0.11
CDK5-201ENST00000297518 CD99L2Q8TCZ2 262 aa14.36□□□□□ -0.11
CDK5-201ENST00000297518 USP17L10C9JJH3 530 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 APPP05067 770 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 CYP2C8P10632 490 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 RAB3GAP1Q15042 981 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 PKN2Q16513 984 aaKnown RBP14.35□□□□□ -0.11
CDK5-201ENST00000297518 SBK1Q52WX2 424 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 TREML2Q5T2D2 321 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 C17orf99Q6UX52 265 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 C16orf86Q6ZW13 317 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 EPB41L4AQ9HCS5 686 aaPredicted RBP14.35□□□□□ -0.11
CDK5-201ENST00000297518 CPA4Q9UI42 421 aa14.35□□□□□ -0.11
CDK5-201ENST00000297518 C19orf81C9J6K1 198 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 PATL2C9JE40 543 aaKnown RBP14.34□□□□□ -0.11
CDK5-201ENST00000297518 SMIM22K7EJ46 135 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 MPHOSPH10O00566 681 aaKnown RBP14.34□□□□□ -0.11
CDK5-201ENST00000297518 CAPN15O75808 1086 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 TDO2P48775 406 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 CDK8P49336 464 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 PABPC4Q13310 644 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■■■■■ 37.4
CDK5-201ENST00000297518 OTOP1Q7RTM1 612 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 TMOD4Q9NZQ9 345 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 PNMA3Q9UL41 463 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 TRIM17Q9Y577 477 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
CDK5-201ENST00000297518 PDE4AP27815 886 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 GUCY1A2P33402 732 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.12
CDK5-201ENST00000297518 KIF22Q14807 665 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 SEPT2Q15019 361 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 ARHGEF6Q15052 776 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 FBXO46Q6PJ61 603 aaPredicted RBP14.33□□□□□ -0.12
CDK5-201ENST00000297518 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 TMEM179Q6ZVK1 233 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 IFNL3Q8IZI9 196 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 SMCR8Q8TEV9 937 aaPredicted RBP14.33□□□□□ -0.12
CDK5-201ENST00000297518 CCDC17Q96LX7 622 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 FEZ1Q99689 392 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 NACAP1Q9BZK3 213 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 EFCC1Q9HA90 598 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 ZSWIM8A7E2V4 1837 aa14.33□□□□□ -0.12
CDK5-201ENST00000297518 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms