RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 STX10O60499 249 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 INPP5BP32019 993 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 METAP2P50579 478 aaKnown RBP eCLIP16.83■□□□□ 0.28
SPIDR-201ENST00000297423 TTC39AQ5SRH9 613 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 LMBR1LQ6UX01 489 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 CMTR1Q8N1G2 835 aaKnown RBP16.83■□□□□ 0.28
SPIDR-201ENST00000297423 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
SPIDR-201ENST00000297423 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 GPTP24298 496 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 STIM1Q13586 685 aa16.83■□□□□ 0.28
SPIDR-201ENST00000297423 NOA1Q8NC60 698 aaKnown RBP16.83■□□□□ 0.28
SPIDR-201ENST00000297423 GOLGA6CA6NDK9 693 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 ZNF213O14771 459 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 GOLGA6DP0CG33 693 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 CASP14P31944 242 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 GOLGA6AQ9NYA3 693 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 MRC1P22897 1456 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 CMA1P23946 247 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 GUCY2CP25092 1073 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 TDO2P48775 406 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 EPHA10Q5JZY3 1008 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 LRRC31Q6UY01 552 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 NCAPGQ9BPX3 1015 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 USP8P40818 1118 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 KCTD16Q68DU8 428 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 HDAC6Q9UBN7 1215 aa16.82■□□□□ 0.28
SPIDR-201ENST00000297423 CDC25AP30304 524 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 PDE6BP35913 854 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 IARSP41252 1262 aaKnown RBP16.81■□□□□ 0.28
SPIDR-201ENST00000297423 TADA2BQ86TJ2 420 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 CERKQ8TCT0 537 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 ZNF594Q96JF6 807 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-201ENST00000297423 KCNJ14Q9UNX9 436 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 TFR2Q9UP52 801 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 PKD1L3Q7Z443 1732 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 A0A1W2PQ27 194 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 A0A1W2PQ64 194 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 A0A1W2PQD8 194 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 YEATS4O95619 227 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 MAP9Q49MG5 647 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 KRT40Q6A162 431 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 OTUD6BQ8N6M0 293 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 EHD4Q9H223 541 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 NDUFAB1O14561 156 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 HSPD1P10809 573 aaKnown RBP16.81■□□□□ 0.28
SPIDR-201ENST00000297423 GBP6Q6ZN66 633 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 FAM71BQ8TC56 605 aa16.81■□□□□ 0.28
SPIDR-201ENST00000297423 MACROD2A1Z1Q3 448 aa16.8■□□□□ 0.28
SPIDR-201ENST00000297423 IDH1O75874 414 aaKnown RBP16.8■□□□□ 0.28
SPIDR-201ENST00000297423 GNGT1P63211 74 aa16.8■□□□□ 0.28
SPIDR-201ENST00000297423 BEND6Q5SZJ8 279 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-201ENST00000297423 SND1Q7KZF4 910 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPIDR-201ENST00000297423 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-201ENST00000297423 SMARCC2Q8TAQ2 1214 aa16.8■□□□□ 0.28
SPIDR-201ENST00000297423 TBC1D2BQ9UPU7 963 aa16.8■□□□□ 0.28
SPIDR-201ENST00000297423 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
SPIDR-201ENST00000297423 MROH7-TTC4A0A0A0MT08 1334 aa16.8■□□□□ 0.28
SPIDR-201ENST00000297423 IKBKBO14920 756 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 FDPSP14324 419 aaKnown RBP16.79■□□□□ 0.28
SPIDR-201ENST00000297423 CDC27P30260 824 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 CDR1P51861 262 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 CCDC57Q2TAC2 916 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 BRAPQ7Z569 592 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 LRRIQ3A6PVS8 624 aaPredicted RBP16.79■□□□□ 0.28
SPIDR-201ENST00000297423 GOLGA8AA7E2F4 631 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 TC2NQ8N9U0 490 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 MARCH10Q8NA82 808 aaPredicted RBP16.79■□□□□ 0.28
SPIDR-201ENST00000297423 TAB2Q9NYJ8 693 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.281e-11■■■■■ 41.2
SPIDR-201ENST00000297423 POSTNQ15063 836 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 RAD9BQ6WBX8 426 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 BARGINQ6ZT62 677 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 DZIP3Q86Y13 1208 aaKnown RBP16.79■□□□□ 0.28
SPIDR-201ENST00000297423 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 ABCA3Q99758 1704 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 hCG_1642624A0A1W2PR95 340 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 CCDC181Q5TID7 509 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 MCTP2Q6DN12 878 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 MMS22LQ6ZRQ5 1243 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 TRIM10Q9UDY6 481 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 ZBTB1Q9Y2K1 713 aa16.79■□□□□ 0.28
SPIDR-201ENST00000297423 PPFIA4O75335 1185 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 CCDC122Q5T0U0 273 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 TICAM2Q86XR7 235 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 ANKZF1Q9H8Y5 726 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
SPIDR-201ENST00000297423 MYO6Q9UM54 1294 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 KRT9P35527 623 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 EIF5P55010 431 aaKnown RBP16.78■□□□□ 0.28
SPIDR-201ENST00000297423 KBTBD3Q8NAB2 608 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
SPIDR-201ENST00000297423 UTYO14607 1347 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 NCOA7Q8NI08 942 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 SCLT1Q96NL6 688 aa16.78■□□□□ 0.28
SPIDR-201ENST00000297423 FAM169AQ9Y6X4 670 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms