RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 PLCG2P16885 1265 aa24.84■■□□□ 1.57
SOX17-201ENST00000297316 IFIT1BQ5T764 474 aaKnown RBP24.84■■□□□ 1.57
SOX17-201ENST00000297316 KIF13BQ9NQT8 1826 aa24.83■■□□□ 1.57
SOX17-201ENST00000297316 TSPY2A6NKD2 308 aa24.83■■□□□ 1.57
SOX17-201ENST00000297316 KIAA2012Q0VF49 1180 aa24.83■■□□□ 1.57
SOX17-201ENST00000297316 RTN1Q16799 776 aa24.83■■□□□ 1.57
SOX17-201ENST00000297316 DACT2Q5SW24 774 aa24.83■■□□□ 1.57
SOX17-201ENST00000297316 CCDC125Q86Z20 511 aa24.83■■□□□ 1.57
SOX17-201ENST00000297316 TMTC2Q8N394 836 aa24.83■■□□□ 1.57
SOX17-201ENST00000297316 KIF28PB7ZC32 967 aa24.83■■□□□ 1.56
SOX17-201ENST00000297316 PPIP5K2O43314 1243 aa24.83■■□□□ 1.56
SOX17-201ENST00000297316 CFAP45Q9UL16 551 aa24.83■■□□□ 1.56
SOX17-201ENST00000297316 ROBO3Q96MS0 1386 aa24.82■■□□□ 1.56
SOX17-201ENST00000297316 DDX4Q9NQI0 724 aaKnown RBP24.82■■□□□ 1.56
SOX17-201ENST00000297316 YDJCA8MPS7 323 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 TFAP4Q01664 338 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 CERS3Q8IU89 383 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 FANCBQ8NB91 859 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 SLC26A6Q9BXS9 759 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 NID2Q14112 1375 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 IARSP41252 1262 aaKnown RBP24.81■■□□□ 1.56
SOX17-201ENST00000297316 R3HDM1Q15032 1099 aaKnown RBP24.81■■□□□ 1.56
SOX17-201ENST00000297316 STRIP1Q5VSL9 837 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 AMOTL1Q8IY63 956 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 MKNK2Q9HBH9 465 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 RCOR1Q9UKL0 485 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 UTRNP46939 3433 aa24.81■■□□□ 1.56
SOX17-201ENST00000297316 GUCY1A2P33402 732 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 CC2D2BQ6DHV5 1058 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 APOBEC3HQ6NTF7 200 aaKnown RBP24.8■■□□□ 1.56
SOX17-201ENST00000297316 CPLX2Q6PUV4 134 aaKnown RBP24.8■■□□□ 1.56
SOX17-201ENST00000297316 ALG1Q9BT22 464 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 FUCA2Q9BTY2 467 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 IL17RBQ9NRM6 502 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 USP40Q9NVE5 1235 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 USP17L3A6NCW0 530 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 USP17L4A6NCW7 530 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 WDHD1O75717 1129 aaPredicted RBP24.8■■□□□ 1.56
SOX17-201ENST00000297316 CDKL5O76039 1030 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 USP17L1Q7RTZ2 530 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 TEKT1Q969V4 418 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 DACT1Q9NYF0 836 aa24.8■■□□□ 1.56
SOX17-201ENST00000297316 GOLGA6L4A6NEF3 574 aa24.79■■□□□ 1.56
SOX17-201ENST00000297316 CRKP46108 304 aa24.79■■□□□ 1.56
SOX17-201ENST00000297316 RCSD1Q6JBY9 416 aa24.79■■□□□ 1.56
SOX17-201ENST00000297316 CDC42EP5Q6NZY7 148 aa24.79■■□□□ 1.56
SOX17-201ENST00000297316 ZNF277Q9NRM2 450 aaPredicted RBP24.79■■□□□ 1.56
SOX17-201ENST00000297316 BAZ2BQ9UIF8 2168 aaKnown RBP24.79■■□□□ 1.56
SOX17-201ENST00000297316 MYH6P13533 1939 aa24.79■■□□□ 1.56
SOX17-201ENST00000297316 KIF23Q02241 960 aaPredicted RBP24.79■■□□□ 1.56
SOX17-201ENST00000297316 CCDC93Q567U6 631 aa24.79■■□□□ 1.56
SOX17-201ENST00000297316 COL4A5P29400 1685 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 IFNAR1P17181 557 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 TROAPQ12815 778 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 NBPF11Q86T75 865 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 BICD2Q8TD16 824 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 PPP1R9BQ96SB3 815 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 PPP1R1BQ9UD71 204 aaPredicted RBP24.78■■□□□ 1.56
SOX17-201ENST00000297316 NR1I2O75469 434 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 LETM1O95202 739 aaPredicted RBP24.78■■□□□ 1.56
SOX17-201ENST00000297316 RASA1P20936 1047 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 CDK8P49336 464 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 SSRP1Q08945 709 aaKnown RBP24.78■■□□□ 1.56
SOX17-201ENST00000297316 CAMK4Q16566 473 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 HHIPL2Q6UWX4 724 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 CATIPQ7Z7H3 387 aa24.78■■□□□ 1.56
SOX17-201ENST00000297316 CACNB3P54284 484 aa24.77■■□□□ 1.56
SOX17-201ENST00000297316 ZNF396Q96N95 335 aaPredicted RBP24.77■■□□□ 1.56
SOX17-201ENST00000297316 FMNL1O95466 1100 aaPredicted RBP24.77■■□□□ 1.56
SOX17-201ENST00000297316 CCDC173Q0VFZ6 552 aa24.77■■□□□ 1.56
SOX17-201ENST00000297316 NFIAQ12857 509 aa24.77■■□□□ 1.56
SOX17-201ENST00000297316 SUPT20HQ8NEM7 779 aa24.77■■□□□ 1.56
SOX17-201ENST00000297316 PLEKHA8P1O95397 391 aa24.76■■□□□ 1.55
SOX17-201ENST00000297316 KRT40Q6A162 431 aa24.76■■□□□ 1.55
SOX17-201ENST00000297316 C16orf86Q6ZW13 317 aa24.76■■□□□ 1.55
SOX17-201ENST00000297316 MTFR1LQ9H019 292 aa24.76■■□□□ 1.55
SOX17-201ENST00000297316 CLIC4Q9Y696 253 aa24.76■■□□□ 1.55
SOX17-201ENST00000297316 TSPY3P0CV98 308 aa24.75■■□□□ 1.55
SOX17-201ENST00000297316 TSPY8P0CW00 308 aa24.75■■□□□ 1.55
SOX17-201ENST00000297316 SLURP2P0DP57 97 aa24.75■■□□□ 1.55
SOX17-201ENST00000297316 RBM5P52756 815 aaKnown RBP eCLIP24.75■■□□□ 1.55
SOX17-201ENST00000297316 ZNF444Q8N0Y2 327 aaPredicted RBP24.75■■□□□ 1.55
SOX17-201ENST00000297316 CRACR2BQ8N4Y2 399 aaPredicted RBP24.75■■□□□ 1.55
SOX17-201ENST00000297316 NUP62CLQ9H1M0 184 aa24.75■■□□□ 1.55
SOX17-201ENST00000297316 hCG_1642624A0A1W2PR95 340 aa24.75■■□□□ 1.55
SOX17-201ENST00000297316 ATL3Q6DD88 541 aa24.75■■□□□ 1.55
SOX17-201ENST00000297316 RCAN1P53805 252 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 MYSM1Q5VVJ2 828 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 ZFPM1Q8IX07 1006 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 RTKN2Q8IZC4 609 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 KLHL34Q8N239 644 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 GOLPH3LQ9H4A5 285 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 STK36Q9NRP7 1315 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 PSDA5PKW4 1024 aaPredicted RBP24.74■■□□□ 1.55
SOX17-201ENST00000297316 ZDHHC15Q96MV8 337 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 RTEL1Q9NZ71 1219 aa24.74■■□□□ 1.55
SOX17-201ENST00000297316 CCDC196A0A1B0GTZ2 297 aa24.73■■□□□ 1.55
SOX17-201ENST00000297316 RAD17O75943 681 aa24.73■■□□□ 1.55
SOX17-201ENST00000297316 POLD1P28340 1107 aa24.73■■□□□ 1.55
SOX17-201ENST00000297316 FKBP1AP62942 108 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms