RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 ZNF710Q8N1W2 664 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 NSUN4Q96CB9 384 aaKnown RBP10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 SRP68Q9UHB9 627 aaKnown RBP10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 FBXO2Q9UK22 296 aaPredicted RBP10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 LY75O60449 1722 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 FOXN1O15353 648 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 ATP1A3P13637 1013 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 PTPREP23469 700 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 RPS8P62241 208 aaKnown RBP10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 PPP2R5BQ15173 497 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 IFIT1BQ5T764 474 aaKnown RBP10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 CTR9Q6PD62 1173 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 TMC6Q7Z403 805 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 FOXP4Q8IVH2 680 aaPredicted RBP10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 SHISA4Q96DD7 197 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 SETDB2Q96T68 719 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 NYXQ9GZU5 481 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 NARFQ9UHQ1 456 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 PCDHA5Q9Y5H7 936 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 EP400Q96L91 3159 aa10.69□□□□□ -0.7
UBLCP1-201ENST00000296786 SEMA3EO15041 775 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 RGL2O15211 777 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 FANCCQ00597 558 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 AKAP17AQ02040 695 aaKnown RBP10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 MYL5Q02045 173 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 MECOMQ03112 1051 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 EVX2Q03828 476 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 NBPF5PQ86XG9 351 aaPredicted RBP10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 IQCA1Q86XH1 822 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 CCDC24Q8N4L8 307 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 CABP5Q9NP86 173 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 AATFQ9NY61 560 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 VPS54Q9P1Q0 977 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 hCG_1642624A0A1W2PR95 340 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 USP17L21D6R901 530 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 PLEKHA8P1O95397 391 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 FGRP09769 529 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 ATP2B1P20020 1258 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 MDM2Q00987 491 aaPredicted RBP10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 FUT2Q10981 343 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 PKN1Q16512 942 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 CATIPQ7Z7H3 387 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 TFCP2L1Q9NZI6 479 aa10.68□□□□□ -0.7
UBLCP1-201ENST00000296786 PDS5AQ29RF7 1337 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 FAM205CA6NFA0 338 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 POLR2DO15514 142 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 CTIFO43310 598 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 PCP11498 1178 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 XBP1P17861 261 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 BMP6P22004 513 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 PRDX5P30044 214 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 HIBADHP31937 336 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 TROAPQ12815 778 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 ARMCX5Q6P1M9 558 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 OLFM4Q6UX06 510 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 ELOA2Q8IYF1 753 aaPredicted RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 SRPRBQ9Y5M8 271 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 MYH1P12882 1939 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 GNPATO15228 680 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 ZPR1O75312 459 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 RPS6KA4O75676 772 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 POSTNQ15063 836 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 CEP135Q66GS9 1140 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 NYAP1Q6ZVC0 841 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 CCAR2Q8N163 923 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 CCDC150Q8NCX0 1101 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 C8orf37Q96NL8 207 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 PHF20Q9BVI0 1012 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 DCP1AQ9NPI6 582 aaPredicted RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 RBM28Q9NW13 759 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 TRMT1Q9NXH9 659 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 HOOK1Q9UJC3 728 aaKnown RBP10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 PAXBP1Q9Y5B6 917 aa10.67□□□□□ -0.7
UBLCP1-201ENST00000296786 PRPF3O43395 683 aaKnown RBP10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 SFPQP23246 707 aaKnown RBP eCLIP10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 KRT2P35908 639 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 PTPN14Q15678 1187 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 EARS2Q5JPH6 523 aaKnown RBP10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 RC3H1Q5TC82 1133 aaKnown RBP10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 PDILTQ8N807 584 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 ZNF592Q92610 1267 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 ARID3AQ99856 593 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 CRNKL1Q9BZJ0 848 aaKnown RBP10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 ANKRD2Q9GZV1 360 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 SERTAD1Q9UHV2 236 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 NMT2O60551 498 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 SERPINC1P01008 464 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 CALM1P0DP23 149 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 CALM2P0DP24 149 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 CALM3P0DP25 149 aa10.66□□□□□ -0.7
UBLCP1-201ENST00000296786 UBASH3AP57075 661 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms