RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MAPKAPK5Q8IW41 473 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 ERMNQ8TAM6 284 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 CCDC42Q96M95 316 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 SH2D4AQ9H788 454 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 GPHNQ9NQX3 736 aaPredicted RBP15.1■□□□□ 0.01
HPS3-201ENST00000296051 TAB2Q9NYJ8 693 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 CHD1O14646 1710 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 DDX41Q9UJV9 622 aaKnown RBP15.1■□□□□ 0.01
HPS3-201ENST00000296051 KRT86O43790 486 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 LPIN2Q92539 896 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 NAPGQ99747 312 aaPredicted RBP15.1■□□□□ 0.01
HPS3-201ENST00000296051 PDE11AQ9HCR9 933 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 CTNND2Q9UQB3 1225 aa15.1■□□□□ 0.01
HPS3-201ENST00000296051 CCDC40Q4G0X9 1142 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 SPECC1LQ69YQ0 1117 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 OTUD6BQ8N6M0 293 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 SERTAD1Q9UHV2 236 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 TRPM1Q7Z4N2 1603 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 RRP36Q96EU6 259 aaKnown RBP15.09■□□□□ 0.01
HPS3-201ENST00000296051 ANGEL1Q9UNK9 670 aaKnown RBP15.09■□□□□ 0.01
HPS3-201ENST00000296051 MAST3O60307 1309 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 SCNN1DP51172 638 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 AMPD3Q01432 767 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 CNGA4Q8IV77 575 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 HELLSQ9NRZ9 838 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 PCDHA5Q9Y5H7 936 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 PTCH1Q13635 1447 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 PLEKHG1Q9ULL1 1385 aa15.09■□□□□ 0.01
HPS3-201ENST00000296051 SPAG1Q07617 926 aa15.08■□□□□ 0.01
HPS3-201ENST00000296051 CETN1Q12798 172 aa15.08■□□□□ 0.01
HPS3-201ENST00000296051 NECTIN1Q15223 517 aa15.08■□□□□ 0.01
HPS3-201ENST00000296051 ZNF710Q8N1W2 664 aa15.08■□□□□ 0.01
HPS3-201ENST00000296051 BABAM1Q9NWV8 329 aa15.08■□□□□ 0.01
HPS3-201ENST00000296051 DBNLQ9UJU6 430 aaKnown RBP15.08■□□□□ 0.01
HPS3-201ENST00000296051 ROBO2Q9HCK4 1378 aa15.08■□□□□ 0.01
HPS3-201ENST00000296051 FAM170AA1A519 330 aa15.08■□□□□ 0
HPS3-201ENST00000296051 CKAP4Q07065 602 aaKnown RBP15.08■□□□□ 0
HPS3-201ENST00000296051 NSMFQ6X4W1 530 aa15.08■□□□□ 0
HPS3-201ENST00000296051 SULF1Q8IWU6 871 aa15.08■□□□□ 0
HPS3-201ENST00000296051 FAM76AQ8TAV0 307 aa15.08■□□□□ 0
HPS3-201ENST00000296051 WDR17Q8IZU2 1322 aa15.08■□□□□ 0
HPS3-201ENST00000296051 ATP5JP18859 108 aa15.08■□□□□ 0
HPS3-201ENST00000296051 GPR161Q8N6U8 529 aaKnown RBP15.08■□□□□ 0
HPS3-201ENST00000296051 AFAP1L1Q8TED9 768 aa15.08■□□□□ 0
HPS3-201ENST00000296051 CSADQ9Y600 493 aa15.08■□□□□ 0
HPS3-201ENST00000296051 PFKFB2O60825 505 aa15.07■□□□□ 0
HPS3-201ENST00000296051 SERPINB2P05120 415 aa15.07■□□□□ 0
HPS3-201ENST00000296051 PDIA3P30101 505 aaKnown RBP15.07■□□□□ 0
HPS3-201ENST00000296051 ASIC1P78348 528 aa15.07■□□□□ 0
HPS3-201ENST00000296051 POSTNQ15063 836 aa15.07■□□□□ 0
HPS3-201ENST00000296051 NSUN7Q8NE18 718 aaKnown RBP15.07■□□□□ 0
HPS3-201ENST00000296051 BLZF1Q9H2G9 400 aa15.07■□□□□ 0
HPS3-201ENST00000296051 ARHGEF10LQ9HCE6 1279 aa15.07■□□□□ 0
HPS3-201ENST00000296051 PSMA7O14818 248 aa15.07■□□□□ 0
HPS3-201ENST00000296051 HSPD1P10809 573 aaKnown RBP15.07■□□□□ 0
HPS3-201ENST00000296051 ZBTB7AO95365 584 aa15.07■□□□□ 0
HPS3-201ENST00000296051 PNMA6AP0CW24 399 aaPredicted RBP15.07■□□□□ 0
HPS3-201ENST00000296051 ZAP70P43403 619 aa15.07■□□□□ 0
HPS3-201ENST00000296051 GYG1P46976 350 aa15.07■□□□□ 0
HPS3-201ENST00000296051 CCDC174Q6PII3 467 aa15.07■□□□□ 0
HPS3-201ENST00000296051 STXBP4Q6ZWJ1 553 aa15.07■□□□□ 0
HPS3-201ENST00000296051 HOMER2Q9NSB8 354 aa15.07■□□□□ 0
HPS3-201ENST00000296051 TACC1O75410 805 aa15.07■□□□□ 0
HPS3-201ENST00000296051 EFCAB8A8MWE9 144 aa15.06■□□□□ 0
HPS3-201ENST00000296051 ZMYND10O75800 440 aa15.06■□□□□ 0
HPS3-201ENST00000296051 HPDP32754 393 aaPredicted RBP15.06■□□□□ 0
HPS3-201ENST00000296051 MICALCLQ6ZW33 695 aa15.06■□□□□ 0
HPS3-201ENST00000296051 CERKQ8TCT0 537 aa15.06■□□□□ 0
HPS3-201ENST00000296051 TGFBRAP1Q8WUH2 860 aa15.06■□□□□ 0
HPS3-201ENST00000296051 AIFM3Q96NN9 605 aa15.06■□□□□ 0
HPS3-201ENST00000296051 MAP2K1Q02750 393 aaPredicted RBP15.06■□□□□ 0
HPS3-201ENST00000296051 USP40Q9NVE5 1235 aa15.06■□□□□ 0
HPS3-201ENST00000296051 CTDSPL2Q05D32 466 aa15.06■□□□□ 0
HPS3-201ENST00000296051 EHBP1Q8NDI1 1231 aa15.06■□□□□ 0
HPS3-201ENST00000296051 EXOC1Q9NV70 894 aa15.06■□□□□ 0
HPS3-201ENST00000296051 MYO5CQ9NQX4 1742 aa15.06■□□□□ 0
HPS3-201ENST00000296051 BTBD18B2RXH4 712 aa15.05■□□□□ 0
HPS3-201ENST00000296051 NDUFAB1O14561 156 aa15.05■□□□□ 0
HPS3-201ENST00000296051 SLC1A4P43007 532 aa15.05■□□□□ 0
HPS3-201ENST00000296051 TBC1D22AQ8WUA7 517 aa15.05■□□□□ 0
HPS3-201ENST00000296051 HOOK2Q96ED9 719 aa15.05■□□□□ 0
HPS3-201ENST00000296051 TTC14Q96N46 770 aa15.05■□□□□ 0
HPS3-201ENST00000296051 NAA15Q9BXJ9 866 aaKnown RBP15.05■□□□□ 0
HPS3-201ENST00000296051 RCOR1Q9UKL0 485 aa15.05■□□□□ 0
HPS3-201ENST00000296051 SMIM23A6NLE4 172 aa15.05■□□□□ 0
HPS3-201ENST00000296051 RESTQ13127 1097 aa15.05■□□□□ 0
HPS3-201ENST00000296051 GRAMD1CQ8IYS0 662 aa15.05■□□□□ 0
HPS3-201ENST00000296051 TEKT1Q969V4 418 aa15.05■□□□□ 0
HPS3-201ENST00000296051 FAM212AQ96EL1 285 aa15.05■□□□□ 0
HPS3-201ENST00000296051 V9GY48 417 aaPredicted RBP15.05■□□□□ 0
HPS3-201ENST00000296051 PARP1P09874 1014 aaKnown RBP15.05■□□□□ -0
HPS3-201ENST00000296051 FBXO18Q8NFZ0 1043 aa15.05■□□□□ -0
HPS3-201ENST00000296051 NEURL1BA8MQ27 555 aa15.05■□□□□ -0
HPS3-201ENST00000296051 TCP10L2B9ZVM9 353 aa15.05■□□□□ -0
HPS3-201ENST00000296051 CUTAO60888 179 aa15.05■□□□□ -0
HPS3-201ENST00000296051 SASH1O94885 1247 aa15.05■□□□□ -0
HPS3-201ENST00000296051 KRT83P78385 493 aa15.05■□□□□ -0
HPS3-201ENST00000296051 TTC19Q6DKK2 380 aaPredicted RBP15.05■□□□□ -0
HPS3-201ENST00000296051 IQUBQ8NA54 791 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 1078.3 ms