RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 PRDM10Q9NQV6 1147 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 FAM217BQ9NTX9 383 aaPredicted RBP7.06□□□□□ -1.28
VCAM1-201ENST00000294728 ANAPC4Q9UJX5 808 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 KCNH3Q9ULD8 1083 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 MRFAP1Q9Y605 127 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 UBN2Q6ZU65 1347 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 MROH5Q6ZUA9 1318 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 ERVV-1B6SEH8 477 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 PATL2C9JE40 543 aaKnown RBP7.06□□□□□ -1.28
VCAM1-201ENST00000294728 TULP2O00295 520 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 MMP1P03956 469 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 CHGBP05060 677 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 TOP1P11387 765 aaKnown RBP7.06□□□□□ -1.28
VCAM1-201ENST00000294728 FGFR2P21802 821 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 TTLL5Q6EMB2 1281 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 TTLL7Q6ZT98 887 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 SH3RF1Q7Z6J0 888 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 RBM46Q8TBY0 533 aaKnown RBP7.06□□□□□ -1.28
VCAM1-201ENST00000294728 STAG1Q8WVM7 1258 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 UBXN4Q92575 508 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 KIFC2Q96AC6 838 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 CTAGE1Q96RT6 745 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 PUS7LQ9H0K6 701 aaKnown RBP7.06□□□□□ -1.28
VCAM1-201ENST00000294728 PPP2R2CQ9Y2T4 447 aa7.06□□□□□ -1.28
VCAM1-201ENST00000294728 CCDC151A5D8V7 595 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 LRRC10BA6NIK2 292 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 RGL2O15211 777 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 ZBTB43O43298 467 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 IFIT5Q13325 482 aaKnown RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 TRIM29Q14134 588 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 TMCO3Q6UWJ1 677 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 GIGYF2Q6Y7W6 1299 aaKnown RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 IQUBQ8NA54 791 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 AATFQ9NY61 560 aaKnown RBP eCLIP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 FBXO2Q9UK22 296 aaPredicted RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 RAB21Q9UL25 225 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 COL5A3P25940 1745 aaPredicted RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 A0A0G2JLW4 131 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 IARSP41252 1262 aaKnown RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 PLCD1P51178 756 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 TEX35Q5T0J7 233 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 TC2NQ8N9U0 490 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 MSANTD4Q8NCY6 345 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 ZNF592Q92610 1267 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 SMARCC1Q92922 1105 aaPredicted RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 SYTL4Q96C24 671 aaPredicted RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 STRBPQ96SI9 672 aaKnown RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 BAG1Q99933 345 aaPredicted RBP7.05□□□□□ -1.28
VCAM1-201ENST00000294728 INTS13Q9NVM9 706 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 NDUFB9Q9Y6M9 179 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 SCN7AQ01118 1682 aa7.05□□□□□ -1.28
VCAM1-201ENST00000294728 DEXIO95424 95 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 FGRP09769 529 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 HOXA7P31268 230 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 MCAMP43121 646 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 ZAP70P43403 619 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 PLA2G4AP47712 749 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 SSRP1Q08945 709 aaKnown RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 NAA30Q147X3 362 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 POSTNQ15063 836 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 ERCC6LQ2NKX8 1250 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 CDKAL1Q5VV42 579 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 ZNF771Q7L3S4 317 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 TXLNBQ8N3L3 684 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 TRMT1Q9NXH9 659 aaKnown RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 DUOX1Q9NRD9 1551 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 MAP2K7O14733 419 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 RPS6KA5O75582 802 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 PDE8BO95263 885 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 SERPINC1P01008 464 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 POLR3DP05423 398 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 FSTL1Q12841 308 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 TRIM14Q14142 442 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 SAFBQ15424 915 aaKnown RBP eCLIP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 ARHGAP29Q52LW3 1261 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 CYB5R4Q7L1T6 521 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 APTXQ7Z2E3 356 aaKnown RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 AMIGO3Q86WK7 504 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 TBC1D10CQ8IV04 446 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 FOXP4Q8IVH2 680 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 STK11IPQ8N1F8 1099 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 CNNM3Q8NE01 707 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 ZNF526Q8TF50 670 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 FERMT2Q96AC1 680 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 KLRG1Q96E93 195 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 GSDMAQ96QA5 445 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 RNF26Q9BY78 433 aaPredicted RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 MAN1B1Q9UKM7 699 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 PCDHA5Q9Y5H7 936 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 ACTN4O43707 911 aaKnown RBP7.04□□□□□ -1.28
VCAM1-201ENST00000294728 BMP6P22004 513 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 PRELPP51888 382 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 TGFB2P61812 414 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 WASHC4Q2M389 1173 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 LONRF3Q496Y0 759 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 KIF6Q6ZMV9 814 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 RASGRP2Q7LDG7 609 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 CEP112Q8N8E3 955 aa7.04□□□□□ -1.28
VCAM1-201ENST00000294728 TTLL11Q8NHH1 800 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms