RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 GJB4Q9NTQ9 266 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 CEP131Q9UPN4 1083 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 DDAH1O94760 285 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 TPM4P67936 248 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 IQCB1Q15051 598 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 SBK1Q52WX2 424 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 AXDND1Q5T1B0 1012 aaPredicted RBP17.05■□□□□ 0.32
TTC9C-201ENST00000294161 IFIT1BQ5T764 474 aaKnown RBP17.05■□□□□ 0.32
TTC9C-201ENST00000294161 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
TTC9C-201ENST00000294161 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 NOL10Q9BSC4 688 aaKnown RBP17.05■□□□□ 0.32
TTC9C-201ENST00000294161 KIAA1468Q9P260 1216 aa17.05■□□□□ 0.32
TTC9C-201ENST00000294161 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
TTC9C-201ENST00000294161 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 MAST2Q6P0Q8 1798 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 AP5Z1O43299 807 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 ZNF202O95125 648 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 PDE4BQ07343 736 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 CHAF1AQ13111 956 aaPredicted RBP17.04■□□□□ 0.32
TTC9C-201ENST00000294161 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 PLA2G4DQ86XP0 818 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 ANKIB1Q9P2G1 1089 aa17.04■□□□□ 0.32
TTC9C-201ENST00000294161 PFKFB1P16118 471 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 SYKP43405 635 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 ST5P78524 1137 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 ZNF804AQ7Z570 1209 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 NBPF11Q86T75 865 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 AMOTL1Q8IY63 956 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
TTC9C-201ENST00000294161 DUOX1Q9NRD9 1551 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 XDHP47989 1333 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 FAM237AA0A1B0GTK4 181 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 LDHCP07864 332 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 PTGER2P43116 358 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 PTPAQ15257 358 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 C15orf52Q6ZUT6 534 aaKnown RBP17.03■□□□□ 0.32
TTC9C-201ENST00000294161 DIS3L2Q8IYB7 885 aaKnown RBP17.03■□□□□ 0.32
TTC9C-201ENST00000294161 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 MAP3K14Q99558 947 aa17.03■□□□□ 0.32
TTC9C-201ENST00000294161 USP17L12C9JPN9 530 aa17.02■□□□□ 0.31
TTC9C-201ENST00000294161 USP17L21D6R901 530 aa17.02■□□□□ 0.31
TTC9C-201ENST00000294161 BAG3O95817 575 aa17.02■□□□□ 0.31
TTC9C-201ENST00000294161 ENAHQ8N8S7 591 aaPredicted RBP17.02■□□□□ 0.31
TTC9C-201ENST00000294161 KRI1Q8N9T8 703 aaKnown RBP17.02■□□□□ 0.31
TTC9C-201ENST00000294161 SPC24Q8NBT2 197 aa17.02■□□□□ 0.31
TTC9C-201ENST00000294161 RPGRQ92834 1020 aaKnown RBP17.02■□□□□ 0.31
TTC9C-201ENST00000294161 MRFAP1L1Q96HT8 127 aa17.02■□□□□ 0.31
TTC9C-201ENST00000294161 TTC12Q9H892 705 aaPredicted RBP17.02■□□□□ 0.31
TTC9C-201ENST00000294161 BRMS1Q9HCU9 246 aa17.02■□□□□ 0.31
TTC9C-201ENST00000294161 PPP1R1BQ9UD71 204 aaPredicted RBP17.02■□□□□ 0.31
TTC9C-201ENST00000294161 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.02■□□□□ 0.31
TTC9C-201ENST00000294161 WTIPA6NIX2 430 aaPredicted RBP17.01■□□□□ 0.31
TTC9C-201ENST00000294161 SMTNL1A8MU46 457 aa17.01■□□□□ 0.31
TTC9C-201ENST00000294161 PRPF3O43395 683 aaKnown RBP17.01■□□□□ 0.31
TTC9C-201ENST00000294161 LDHBP07195 334 aaKnown RBP17.01■□□□□ 0.31
TTC9C-201ENST00000294161 NOLC1Q14978 699 aaKnown RBP eCLIP17.01■□□□□ 0.31
TTC9C-201ENST00000294161 C11orf57Q6ZUT1 292 aaPredicted RBP17.01■□□□□ 0.31
TTC9C-201ENST00000294161 ELOA2Q8IYF1 753 aaPredicted RBP17.01■□□□□ 0.31
TTC9C-201ENST00000294161 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
TTC9C-201ENST00000294161 DCP1AQ9NPI6 582 aaPredicted RBP17.01■□□□□ 0.31
TTC9C-201ENST00000294161 AATFQ9NY61 560 aaKnown RBP eCLIP17.01■□□□□ 0.31
TTC9C-201ENST00000294161 FAM13BQ9NYF5 915 aa17.01■□□□□ 0.31
TTC9C-201ENST00000294161 ECM29Q5VYK3 1845 aa17.01■□□□□ 0.31
TTC9C-201ENST00000294161 UTRNP46939 3433 aa17.01■□□□□ 0.31
TTC9C-201ENST00000294161 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
TTC9C-201ENST00000294161 BMP15O95972 392 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 KLRK1P26718 216 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 MARCKSP29966 332 aaPredicted RBP17■□□□□ 0.31
TTC9C-201ENST00000294161 CHRNA5P30532 468 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 NLRP12P59046 1061 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 DHX8Q14562 1220 aaKnown RBP17■□□□□ 0.31
TTC9C-201ENST00000294161 RESP18Q5W5W9 173 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 CTCFLQ8NI51 663 aaPredicted RBP17■□□□□ 0.31
TTC9C-201ENST00000294161 ZNF384Q8TF68 577 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 HPSEQ9Y251 543 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 MORC2Q9Y6X9 1032 aaPredicted RBP17■□□□□ 0.31
TTC9C-201ENST00000294161 NEMFO60524 1076 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 WDHD1O75717 1129 aaPredicted RBP17■□□□□ 0.31
TTC9C-201ENST00000294161 DNTTIP2Q5QJE6 756 aaKnown RBP17■□□□□ 0.31
TTC9C-201ENST00000294161 CCDC34Q96HJ3 373 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
TTC9C-201ENST00000294161 CLIP2Q9UDT6 1046 aa17■□□□□ 0.31
TTC9C-201ENST00000294161 IRS2Q9Y4H2 1338 aa16.99■□□□□ 0.31
TTC9C-201ENST00000294161 BTBD18B2RXH4 712 aa16.99■□□□□ 0.31
TTC9C-201ENST00000294161 ATP2B4P23634 1241 aa16.99■□□□□ 0.31
TTC9C-201ENST00000294161 POLD1P28340 1107 aa16.99■□□□□ 0.31
TTC9C-201ENST00000294161 PRDX5P30044 214 aa16.99■□□□□ 0.31
TTC9C-201ENST00000294161 ZNF579Q8NAF0 562 aaKnown RBP16.99■□□□□ 0.31
TTC9C-201ENST00000294161 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
TTC9C-201ENST00000294161 SPTLC3Q9NUV7 552 aa16.99■□□□□ 0.31
TTC9C-201ENST00000294161 GUCY1A2P33402 732 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 KIAA1551Q9HCM1 1747 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 C10orf71Q711Q0 1435 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 KIF5BP33176 963 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 KRT2P35908 639 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 USP5P45974 858 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms