RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 RBM6P78332 1123 aaKnown RBP18.16■□□□□ 0.5
NCKIPSD-201ENST00000294129 SEC23AQ15436 765 aa18.16■□□□□ 0.5
NCKIPSD-201ENST00000294129 CTR9Q6PD62 1173 aa18.16■□□□□ 0.5
NCKIPSD-201ENST00000294129 FOXP4Q8IVH2 680 aaPredicted RBP18.16■□□□□ 0.5
NCKIPSD-201ENST00000294129 NCAPHQ15003 741 aa18.16■□□□□ 0.5
NCKIPSD-201ENST00000294129 KRBA2Q6ZNG9 492 aa18.16■□□□□ 0.5
NCKIPSD-201ENST00000294129 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
NCKIPSD-201ENST00000294129 SERPINC1P01008 464 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 NSUN4Q96CB9 384 aaKnown RBP18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 SHISA4Q96DD7 197 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 EARS2Q5JPH6 523 aaKnown RBP18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 SERTAD1Q9UHV2 236 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 MYH13Q9UKX3 1938 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 SMTNL1A8MU46 457 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 PRR29P0C7W0 189 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 CCZ1BP86790 482 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 CCZ1P86791 482 aaPredicted RBP18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 FANCCQ00597 558 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 ANKIB1Q9P2G1 1089 aa18.15■□□□□ 0.5
NCKIPSD-201ENST00000294129 GOLGB1Q14789 3259 aaKnown RBP18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 MYH6P13533 1939 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 RILPL1Q5EBL4 403 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 OLFM4Q6UX06 510 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 GOLGA8FQ08AF8 430 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 GOLGA8DPQ0D2H9 430 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 CFAP100Q494V2 611 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 DPF2Q92785 391 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 NARFQ9UHQ1 456 aa18.14■□□□□ 0.49
NCKIPSD-201ENST00000294129 TPTE2Q6XPS3 522 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 FBXO33Q7Z6M2 555 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 DZIP1Q86YF9 867 aaKnown RBP18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 ZNF710Q8N1W2 664 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 TIGD1Q96MW7 591 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 FBXO2Q9UK22 296 aaPredicted RBP18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 RTCBQ9Y3I0 505 aaKnown RBP18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 PDE4BQ07343 736 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 TRMT44Q8IYL2 757 aaKnown RBP18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 NYXQ9GZU5 481 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 CSRNP2Q9H175 543 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 TIAM2Q8IVF5 1701 aa18.13■□□□□ 0.49
NCKIPSD-201ENST00000294129 ARHGEF1Q92888 912 aaKnown RBP18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 CRNKL1Q9BZJ0 848 aaKnown RBP18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 DCP1AQ9NPI6 582 aaPredicted RBP18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 FANCLQ9NW38 375 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 TUBE1Q9UJT0 475 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 CACNA1SQ13698 1873 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 TSPY2A6NKD2 308 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 WNT7AO00755 349 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 USP17L8P0C7I0 530 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 MYL5Q02045 173 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 DHX58Q96C10 678 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 BPIFA3Q9BQP9 254 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 BRIP1Q9BX63 1249 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 ANAPC4Q9UJX5 808 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 XBP1P17861 261 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 BMP6P22004 513 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 CASP1P29466 404 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 AFMP43652 599 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 UBASH3AP57075 661 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 ZNF174Q15697 407 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 PKN1Q16512 942 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 CEP135Q66GS9 1140 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 ARMCX5Q6P1M9 558 aa18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 RNF26Q9BY78 433 aaPredicted RBP18.12■□□□□ 0.49
NCKIPSD-201ENST00000294129 TOM1O60784 492 aa18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 SFPQP23246 707 aaKnown RBP eCLIP18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 PTPREP23469 700 aa18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 NAA30Q147X3 362 aaPredicted RBP18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 POSTNQ15063 836 aa18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 MTERF4Q7Z6M4 381 aaKnown RBP18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 CNTNAP4Q9C0A0 1308 aa18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 VEGFAP15692 232 aaPredicted RBP18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 KRT2P35908 639 aa18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 PTPN14Q15678 1187 aa18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 EPSTI1Q96J88 318 aa18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 HSD3B7Q9H2F3 369 aa18.11■□□□□ 0.49
NCKIPSD-201ENST00000294129 TMEM232C9JQI7 657 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 NEMFO60524 1076 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 TROAPQ12815 778 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 DIXDC1Q155Q3 683 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 CTCFLQ8NI51 663 aaPredicted RBP18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 LAMB2P55268 1798 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 TRIM75PA6NK02 468 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 UBAP1LF5GYI3 381 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 RFC4P35249 363 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 GSDMDP57764 484 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 STAMQ92783 540 aa18.1■□□□□ 0.49
NCKIPSD-201ENST00000294129 SLC10A5Q5PT55 438 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 MAN1B1Q9UKM7 699 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 USP5P45974 858 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 NFIXQ14938 502 aa18.09■□□□□ 0.49
NCKIPSD-201ENST00000294129 KLHL10Q6JEL2 608 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms