RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 STX10O60499 249 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 CNNM4Q6P4Q7 775 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 ZMAT2Q96NC0 199 aaKnown RBP17.93■□□□□ 0.46
SSRP1-202ENST00000293880 TEX14Q8IWB6 1497 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
SSRP1-202ENST00000293880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.93■□□□□ 0.46
SSRP1-202ENST00000293880 PFDN1O60925 122 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 G2E3Q7L622 706 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 CMTR1Q8N1G2 835 aaKnown RBP17.92■□□□□ 0.46
SSRP1-202ENST00000293880 NSFL1CQ9UNZ2 370 aaKnown RBP17.92■□□□□ 0.46
SSRP1-202ENST00000293880 RPSAP08865 295 aaKnown RBP17.92■□□□□ 0.46
SSRP1-202ENST00000293880 RPL13P26373 211 aaKnown RBP17.92■□□□□ 0.46
SSRP1-202ENST00000293880 ARHGAP44Q17R89 818 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 MYRIPQ8NFW9 859 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 RILPQ96NA2 401 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 BUB1O43683 1085 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 ATP1A2P50993 1020 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 ADAT2Q7Z6V5 191 aaKnown RBP17.92■□□□□ 0.46
SSRP1-202ENST00000293880 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 ABTB1Q969K4 478 aaPredicted RBP17.92■□□□□ 0.46
SSRP1-202ENST00000293880 CCDC105Q8IYK2 499 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 DCTPP1Q9H773 170 aa17.92■□□□□ 0.46
SSRP1-202ENST00000293880 AKAP4Q5JQC9 854 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 OGFOD1Q8N543 542 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 VCXQ9H320 206 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 GINS2Q9Y248 185 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 OPHN1O60890 802 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 ACTN4O43707 911 aaKnown RBP17.91■□□□□ 0.46
SSRP1-202ENST00000293880 JAK2O60674 1132 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 ALDH1L1O75891 902 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 KRT19P08727 400 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 KRT15P19012 456 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 TIMM10P62072 90 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 DESI2Q9BSY9 194 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 CAPN7Q9Y6W3 813 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 LIN9Q5TKA1 542 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 UHMK1Q8TAS1 419 aaKnown RBP17.91■□□□□ 0.46
SSRP1-202ENST00000293880 TBC1D31Q96DN5 1066 aa17.91■□□□□ 0.46
SSRP1-202ENST00000293880 GCNT3O95395 438 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 TRPC3Q13507 836 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.9■□□□□ 0.46
SSRP1-202ENST00000293880 ZNF202O95125 648 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 ATICP31939 592 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 TAOK1Q7L7X3 1001 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 RDH13Q8NBN7 331 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 RIPOR2Q9Y4F9 1068 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 LONRF2Q1L5Z9 754 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 HELLSQ9NRZ9 838 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
SSRP1-202ENST00000293880 AATFQ9NY61 560 aaKnown RBP eCLIP17.9■□□□□ 0.46
SSRP1-202ENST00000293880 MAP7Q14244 749 aa17.9■□□□□ 0.46
SSRP1-202ENST00000293880 LSM14BQ9BX40 385 aaKnown RBP17.9■□□□□ 0.46
SSRP1-202ENST00000293880 FAM207AQ9NSI2 230 aaPredicted RBP17.89■□□□□ 0.46
SSRP1-202ENST00000293880 I3L4J1 428 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 GNGT1P63211 74 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 TTC38Q5R3I4 469 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 RNF10Q8N5U6 811 aaKnown RBP17.89■□□□□ 0.45
SSRP1-202ENST00000293880 MYCT1Q8N699 235 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 MRFAP1L1Q96HT8 127 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 CABS1Q96KC9 395 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 LMTK3Q96Q04 1460 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 NPHP3Q7Z494 1330 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 CETN3O15182 167 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 TRIM14Q14142 442 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 POSTNQ15063 836 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 PTPN21Q16825 1174 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 RAD50Q92878 1312 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 PLCD1P51178 756 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 MUM1Q2TAK8 710 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 TAF5LO75529 589 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 STRN3Q13033 797 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 ERCC6LQ2NKX8 1250 aa17.89■□□□□ 0.45
SSRP1-202ENST00000293880 BAG2O95816 211 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 DENND2CQ68D51 928 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 NXNQ6DKJ4 435 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 AFG3L2Q9Y4W6 797 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 MIER3Q7Z3K6 550 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 MX2P20592 715 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 TUBB4BP68371 445 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 INTS4Q96HW7 963 aaKnown RBP17.88■□□□□ 0.45
SSRP1-202ENST00000293880 SPECC1L-ADORA2AF8WAN1 911 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 DEXIO95424 95 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 RRAGAQ7L523 313 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 CSRNP2Q9H175 543 aa17.88■□□□□ 0.45
SSRP1-202ENST00000293880 VAMP4O75379 141 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 PHACTR3Q96KR7 559 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 MRPL44Q9H9J2 332 aaKnown RBP17.87■□□□□ 0.45
SSRP1-202ENST00000293880 BCL2L12Q9HB09 334 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 NLRC4Q9NPP4 1024 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSRP1-202ENST00000293880 GIGYF1O75420 1035 aaPredicted RBP17.87■□□□□ 0.45
SSRP1-202ENST00000293880 GOLGA8FQ08AF8 430 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 GOLGA8DPQ0D2H9 430 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 PDCD7Q8N8D1 485 aaKnown RBP17.87■□□□□ 0.45
SSRP1-202ENST00000293880 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
SSRP1-202ENST00000293880 LIG3P49916 1009 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 VWA3BQ502W6 1294 aa17.87■□□□□ 0.45
SSRP1-202ENST00000293880 GJA3Q9Y6H8 435 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms