RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 CMTR1Q8N1G2 835 aaKnown RBP21.9■■□□□ 1.1
LSM12-201ENST00000293406 GPR161Q8N6U8 529 aaKnown RBP21.9■■□□□ 1.1
LSM12-201ENST00000293406 STAG1Q8WVM7 1258 aa21.9■■□□□ 1.1
LSM12-201ENST00000293406 MED15Q96RN5 788 aa21.9■■□□□ 1.1
LSM12-201ENST00000293406 ATP8B1O43520 1251 aa21.9■■□□□ 1.1
LSM12-201ENST00000293406 RASGRF1Q13972 1273 aa21.9■■□□□ 1.1
LSM12-201ENST00000293406 KIFC2Q96AC6 838 aa21.9■■□□□ 1.1
LSM12-201ENST00000293406 NACAP1Q9BZK3 213 aa21.9■■□□□ 1.1
LSM12-201ENST00000293406 EPC1Q9H2F5 836 aa21.9■■□□□ 1.1
LSM12-201ENST00000293406 TOGARAM1Q9Y4F4 1720 aa21.9■■□□□ 1.1
LSM12-201ENST00000293406 PRKAB2O43741 272 aa21.89■■□□□ 1.1
LSM12-201ENST00000293406 SLC5A1P13866 664 aa21.89■■□□□ 1.1
LSM12-201ENST00000293406 ERCC5P28715 1186 aaPredicted RBP21.89■■□□□ 1.1
LSM12-201ENST00000293406 DESI2Q9BSY9 194 aa21.89■■□□□ 1.1
LSM12-201ENST00000293406 CSRNP2Q9H175 543 aa21.89■■□□□ 1.1
LSM12-201ENST00000293406 TEX35Q5T0J7 233 aa21.89■■□□□ 1.09
LSM12-201ENST00000293406 TMTC2Q8N394 836 aa21.89■■□□□ 1.09
LSM12-201ENST00000293406 SPATA20Q8TB22 786 aa21.89■■□□□ 1.09
LSM12-201ENST00000293406 CABP5Q9NP86 173 aa21.89■■□□□ 1.09
LSM12-201ENST00000293406 A0A1B0GTH6 734 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 EVA1CP58658 441 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 USP49Q70CQ1 688 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 OXER1Q8TDS5 423 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 NUP133Q8WUM0 1156 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 SLC4A4Q9Y6R1 1079 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 MYH3P11055 1940 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 TIAM2Q8IVF5 1701 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 AKR1B15C9JRZ8 316 aaPredicted RBP21.88■■□□□ 1.09
LSM12-201ENST00000293406 GNAT2P19087 354 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 KARSQ15046 597 aaKnown RBP21.88■■□□□ 1.09
LSM12-201ENST00000293406 FANCBQ8NB91 859 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 CCDC34Q96HJ3 373 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 SEC31BQ9NQW1 1179 aa21.88■■□□□ 1.09
LSM12-201ENST00000293406 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
LSM12-201ENST00000293406 CHD4Q14839 1912 aa21.87■■□□□ 1.09
LSM12-201ENST00000293406 CCDC175P0C221 793 aa21.87■■□□□ 1.09
LSM12-201ENST00000293406 CYP2C19P33261 490 aa21.87■■□□□ 1.09
LSM12-201ENST00000293406 CC2D1AQ6P1N0 951 aaPredicted RBP21.87■■□□□ 1.09
LSM12-201ENST00000293406 RSRC2Q7L4I2 434 aaKnown RBP21.87■■□□□ 1.09
LSM12-201ENST00000293406 LCORLQ8N3X6 602 aa21.87■■□□□ 1.09
LSM12-201ENST00000293406 BRINP3Q76B58 766 aa21.86■■□□□ 1.09
LSM12-201ENST00000293406 ZNF654Q8IZM8 581 aa21.86■■□□□ 1.09
LSM12-201ENST00000293406 CCDC12Q8WUD4 166 aaPredicted RBP21.86■■□□□ 1.09
LSM12-201ENST00000293406 DHX58Q96C10 678 aa21.86■■□□□ 1.09
LSM12-201ENST00000293406 PANX2Q96RD6 677 aa21.86■■□□□ 1.09
LSM12-201ENST00000293406 MTA3Q9BTC8 594 aa21.86■■□□□ 1.09
LSM12-201ENST00000293406 TBC1D8O95759 1140 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 RCAN1P53805 252 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 MTF1Q14872 753 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 RABGGTAQ92696 567 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 GOLGA1Q92805 767 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 MRPL44Q9H9J2 332 aaKnown RBP21.85■■□□□ 1.09
LSM12-201ENST00000293406 SOWAHDA6NJG2 315 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 SNAP23O00161 211 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 POLR3GO15318 223 aaPredicted RBP21.85■■□□□ 1.09
LSM12-201ENST00000293406 CT47A1Q5JQC4 288 aaPredicted RBP21.85■■□□□ 1.09
LSM12-201ENST00000293406 UBAC1Q9BSL1 405 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 RNF41Q9H4P4 317 aaPredicted RBP21.85■■□□□ 1.09
LSM12-201ENST00000293406 PNPLA7Q6ZV29 1317 aa21.85■■□□□ 1.09
LSM12-201ENST00000293406 TEX33O43247 280 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 SASH3O75995 380 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 SPATA1Q5VX52 437 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 PPFIBP1Q86W92 1011 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 PARD6BQ9BYG5 372 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 ARFGAP3Q9NP61 516 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 AATFQ9NY61 560 aaKnown RBP eCLIP21.84■■□□□ 1.09
LSM12-201ENST00000293406 TRIM75PA6NK02 468 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 CYP19A1P11511 503 aaPredicted RBP21.84■■□□□ 1.09
LSM12-201ENST00000293406 AFMP43652 599 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 AKAP17AQ02040 695 aaKnown RBP21.84■■□□□ 1.09
LSM12-201ENST00000293406 KLHL10Q6JEL2 608 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 IGSF22Q8N9C0 903 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 ZBTB1Q9Y2K1 713 aa21.84■■□□□ 1.09
LSM12-201ENST00000293406 APTXQ7Z2E3 356 aaKnown RBP21.83■■□□□ 1.09
LSM12-201ENST00000293406 NAA15Q9BXJ9 866 aaKnown RBP21.83■■□□□ 1.09
LSM12-201ENST00000293406 RNF26Q9BY78 433 aaPredicted RBP21.83■■□□□ 1.09
LSM12-201ENST00000293406 UBXN6Q9BZV1 441 aa21.83■■□□□ 1.09
LSM12-201ENST00000293406 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.83■■□□□ 1.09
LSM12-201ENST00000293406 CALCOCO1Q9P1Z2 691 aa21.83■■□□□ 1.09
LSM12-201ENST00000293406 SYNRGQ9UMZ2 1314 aa21.83■■□□□ 1.09
LSM12-201ENST00000293406 XBP1P17861 261 aa21.83■■□□□ 1.08
LSM12-201ENST00000293406 RBL2Q08999 1139 aa21.83■■□□□ 1.08
LSM12-201ENST00000293406 MIGA1Q8NAN2 632 aa21.83■■□□□ 1.08
LSM12-201ENST00000293406 EPSTI1Q96J88 318 aa21.83■■□□□ 1.08
LSM12-201ENST00000293406 IRX2Q9BZI1 471 aaPredicted RBP21.83■■□□□ 1.08
LSM12-201ENST00000293406 LZTFL1Q9NQ48 299 aa21.83■■□□□ 1.08
LSM12-201ENST00000293406 ARAP2Q8WZ64 1704 aa21.82■■□□□ 1.08
LSM12-201ENST00000293406 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
LSM12-201ENST00000293406 DOCK2Q92608 1830 aa21.82■■□□□ 1.08
LSM12-201ENST00000293406 A0A087X0B3 334 aa21.82■■□□□ 1.08
LSM12-201ENST00000293406 STX17P56962 302 aa21.82■■□□□ 1.08
LSM12-201ENST00000293406 ADGRG1Q9Y653 693 aa21.82■■□□□ 1.08
LSM12-201ENST00000293406 LRP5O75197 1615 aa21.82■■□□□ 1.08
LSM12-201ENST00000293406 CD44P16070 742 aaKnown RBP21.81■■□□□ 1.08
LSM12-201ENST00000293406 PPARAQ07869 468 aa21.81■■□□□ 1.08
LSM12-201ENST00000293406 CPLX3Q8WVH0 158 aa21.81■■□□□ 1.08
LSM12-201ENST00000293406 PAGE5Q96GU1 130 aa21.81■■□□□ 1.08
LSM12-201ENST00000293406 FAM205CA6NFA0 338 aa21.81■■□□□ 1.08
LSM12-201ENST00000293406 ERVV-1B6SEH8 477 aa21.81■■□□□ 1.08
LSM12-201ENST00000293406 TXLNAP40222 546 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms