RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 IGDCC4Q8TDY8 1250 aa19.52■□□□□ 0.72
CPSF4-201ENST00000292476 TGFBRAP1Q8WUH2 860 aa19.52■□□□□ 0.72
CPSF4-201ENST00000292476 DAGLAQ9Y4D2 1042 aa19.52■□□□□ 0.72
CPSF4-201ENST00000292476 CCDC69A6NI79 296 aa19.52■□□□□ 0.71
CPSF4-201ENST00000292476 POTECB2RU33 542 aa19.52■□□□□ 0.71
CPSF4-201ENST00000292476 CCDC192P0DO97 292 aa19.52■□□□□ 0.71
CPSF4-201ENST00000292476 RCAN1P53805 252 aa19.52■□□□□ 0.71
CPSF4-201ENST00000292476 SCRN1Q12765 414 aa19.52■□□□□ 0.71
CPSF4-201ENST00000292476 C12orf60Q5U649 245 aa19.52■□□□□ 0.71
CPSF4-201ENST00000292476 CPLX2Q6PUV4 134 aaKnown RBP19.52■□□□□ 0.71
CPSF4-201ENST00000292476 NFXL1Q6ZNB6 911 aa19.52■□□□□ 0.71
CPSF4-201ENST00000292476 DDX19AQ9NUU7 478 aaKnown RBP19.52■□□□□ 0.71
CPSF4-201ENST00000292476 YDJCA8MPS7 323 aa19.51■□□□□ 0.71
CPSF4-201ENST00000292476 POLR3DP05423 398 aaPredicted RBP19.51■□□□□ 0.71
CPSF4-201ENST00000292476 VEGFAP15692 232 aaPredicted RBP19.51■□□□□ 0.71
CPSF4-201ENST00000292476 WTAPQ15007 396 aa19.51■□□□□ 0.71
CPSF4-201ENST00000292476 CCDC178Q5BJE1 867 aa19.51■□□□□ 0.71
CPSF4-201ENST00000292476 ROBO3Q96MS0 1386 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 GOLGA8BA8MQT2 603 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 RAD17O75943 681 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 CDKL5O76039 1030 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 PTMAP06454 111 aaKnown RBP19.5■□□□□ 0.71
CPSF4-201ENST00000292476 RHBDL3P58872 404 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 CXCL9Q07325 125 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 RESTQ13127 1097 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 ATL3Q6DD88 541 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 GPC2Q8N158 579 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 ZDHHC15Q96MV8 337 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 SERPINA10Q9UK55 444 aa19.5■□□□□ 0.71
CPSF4-201ENST00000292476 F8W031 263 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-201ENST00000292476 CPLX1O14810 134 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 PPP2R5BQ15173 497 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 RBM43Q6ZSC3 357 aaKnown RBP19.49■□□□□ 0.71
CPSF4-201ENST00000292476 SPATA32Q96LK8 384 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 NUP62CLQ9H1M0 184 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 LY9Q9HBG7 655 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.49■□□□□ 0.71
CPSF4-201ENST00000292476 SLC12A7Q9Y666 1083 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 RANBP6O60518 1105 aaKnown RBP19.49■□□□□ 0.71
CPSF4-201ENST00000292476 CRKP46108 304 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 MAP3K11Q16584 847 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 LEO1Q8WVC0 666 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-201ENST00000292476 CFAP45Q9UL16 551 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 TAOK2Q9UL54 1235 aa19.49■□□□□ 0.71
CPSF4-201ENST00000292476 LAMB1P07942 1786 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 ZBTB43O43298 467 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 METAP2P50579 478 aaKnown RBP eCLIP19.48■□□□□ 0.71
CPSF4-201ENST00000292476 C1QTNF8P60827 252 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 CCT2P78371 535 aaKnown RBP19.48■□□□□ 0.71
CPSF4-201ENST00000292476 APOA5Q6Q788 366 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 MAPKAPK5Q8IW41 473 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 L3MBTL3Q96JM7 780 aaPredicted RBP19.48■□□□□ 0.71
CPSF4-201ENST00000292476 INCENPQ9NQS7 918 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 KCNQ5Q9NR82 932 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 USP40Q9NVE5 1235 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 FLT1P17948 1338 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 MYH15Q9Y2K3 1946 aa19.48■□□□□ 0.71
CPSF4-201ENST00000292476 CCDC196A0A1B0GTZ2 297 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 GOLGA6L4A6NEF3 574 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 TPM3P06753 285 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 MMP14P50281 582 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 CIAPIN1Q6FI81 312 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 FERMT3Q86UX7 667 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 RGS22Q8NE09 1264 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 NSUN7Q8NE18 718 aaKnown RBP19.47■□□□□ 0.71
CPSF4-201ENST00000292476 ZSCAN10Q96SZ4 725 aaPredicted RBP19.47■□□□□ 0.71
CPSF4-201ENST00000292476 MKNK2Q9HBH9 465 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 BAZ2AQ9UIF9 1905 aaKnown RBP19.47■□□□□ 0.71
CPSF4-201ENST00000292476 SCN9AQ15858 1988 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 SCN4AP35499 1836 aa19.47■□□□□ 0.71
CPSF4-201ENST00000292476 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 H3BQV1 296 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 TOMM70O94826 608 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 IFFO2Q5TF58 517 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 KIAA0825Q8IV33 1275 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 USP25Q9UHP3 1055 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 HDAC9Q9UKV0 1011 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 TACC3Q9Y6A5 838 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 PTPDC1A2A3K4 754 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 IQCA1LA6NCM1 817 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 TSPY2A6NKD2 308 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 JAK2O60674 1132 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 ADCY5O95622 1261 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 CAVIN2O95810 425 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 CALM1P0DP23 149 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 CALM2P0DP24 149 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 CALM3P0DP25 149 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 SCNN1DP51172 638 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 ZNF444Q8N0Y2 327 aaPredicted RBP19.46■□□□□ 0.71
CPSF4-201ENST00000292476 STK11IPQ8N1F8 1099 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 MXD3Q9BW11 206 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 CLSTN2Q9H4D0 955 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 GPHNQ9NQX3 736 aaPredicted RBP19.46■□□□□ 0.71
CPSF4-201ENST00000292476 HACL1Q9UJ83 578 aa19.46■□□□□ 0.71
CPSF4-201ENST00000292476 TNKSO95271 1327 aa19.45■□□□□ 0.7
CPSF4-201ENST00000292476 NPM3O75607 178 aaKnown RBP19.45■□□□□ 0.7
CPSF4-201ENST00000292476 VIL1P09327 827 aaKnown RBP19.45■□□□□ 0.7
CPSF4-201ENST00000292476 APOBEC3HQ6NTF7 200 aaKnown RBP19.45■□□□□ 0.7
CPSF4-201ENST00000292476 RSBN1LQ6PCB5 846 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms