RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 BRIP1Q9BX63 1249 aa21.11■□□□□ 0.97
SHKBP1-201ENST00000291842 TNNT1P13805 278 aa21.11■□□□□ 0.97
SHKBP1-201ENST00000291842 AKAP17AQ02040 695 aaKnown RBP21.11■□□□□ 0.97
SHKBP1-201ENST00000291842 FBXO2Q9UK22 296 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-201ENST00000291842 PCDHA5Q9Y5H7 936 aa21.11■□□□□ 0.97
SHKBP1-201ENST00000291842 V9GY48 417 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-201ENST00000291842 FAM237AA0A1B0GTK4 181 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 NPHP1O15259 732 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 RPS6KA4O75676 772 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 CCZ1BP86790 482 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 CCZ1P86791 482 aaPredicted RBP21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 RILPL1Q5EBL4 403 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 FAM47AQ5JRC9 791 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 TMC6Q7Z403 805 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 NYXQ9GZU5 481 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 SMTNL1A8MU46 457 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 CYP2D6P10635 497 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 GTF2F1P35269 517 aaKnown RBP eCLIP21.1■□□□□ 0.971e-6■■■■■ 54.6
SHKBP1-201ENST00000291842 PKN1Q16512 942 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 CATIPQ7Z7H3 387 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 IQCA1Q86XH1 822 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 PDILTQ8N807 584 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 HSD3B7Q9H2F3 369 aa21.1■□□□□ 0.97
SHKBP1-201ENST00000291842 POLR2DO15514 142 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 TPM4P67936 248 aa21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 EARS2Q5JPH6 523 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 TRMT1Q9NXH9 659 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 USP49Q70CQ1 688 aa21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 GRAMD1CQ8IYS0 662 aa21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 RNF26Q9BY78 433 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 CCNL1Q9UK58 526 aaPredicted RBP21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 DUOX1Q9NRD9 1551 aa21.09■□□□□ 0.97
SHKBP1-201ENST00000291842 PTPREP23469 700 aa21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 RCAN1P53805 252 aa21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 SCN7AQ01118 1682 aa21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 VPS72Q15906 364 aa21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 TPTE2Q6XPS3 522 aa21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 ZNF710Q8N1W2 664 aa21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 ZNF592Q92610 1267 aa21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 ARHGEF1Q92888 912 aaKnown RBP21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 DCP1AQ9NPI6 582 aaPredicted RBP21.08■□□□□ 0.97
SHKBP1-201ENST00000291842 NEMFO60524 1076 aa21.08■□□□□ 0.96
SHKBP1-201ENST00000291842 BMP6P22004 513 aa21.08■□□□□ 0.96
SHKBP1-201ENST00000291842 FANCCQ00597 558 aa21.08■□□□□ 0.96
SHKBP1-201ENST00000291842 FUT2Q10981 343 aa21.08■□□□□ 0.96
SHKBP1-201ENST00000291842 PTPN21Q16825 1174 aa21.08■□□□□ 0.96
SHKBP1-201ENST00000291842 SERTAD1Q9UHV2 236 aa21.08■□□□□ 0.96
SHKBP1-201ENST00000291842 TOM1O60784 492 aa21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 TROAPQ12815 778 aa21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 HSP90AA4PQ58FG1 418 aa21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 NOM1Q5C9Z4 860 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 RTCBQ9Y3I0 505 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 MYH6P13533 1939 aa21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 MYH13Q9UKX3 1938 aa21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 BAZ2BQ9UIF8 2168 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 PRR29P0C7W0 189 aa21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 PDE4BQ07343 736 aa21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-201ENST00000291842 IKBKBO14920 756 aa21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 SEMA3EO15041 775 aa21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 TM4SF1P30408 202 aa21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 MDM2Q00987 491 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 RC3H1Q5TC82 1133 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 DPF2Q92785 391 aa21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 CRNKL1Q9BZJ0 848 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 ANKRD2Q9GZV1 360 aa21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 CSRNP2Q9H175 543 aa21.06■□□□□ 0.96
SHKBP1-201ENST00000291842 WNT7AO00755 349 aa21.05■□□□□ 0.96
SHKBP1-201ENST00000291842 MYL5Q02045 173 aa21.05■□□□□ 0.96
SHKBP1-201ENST00000291842 ARMCX5Q6P1M9 558 aa21.05■□□□□ 0.96
SHKBP1-201ENST00000291842 OLFM4Q6UX06 510 aa21.05■□□□□ 0.96
SHKBP1-201ENST00000291842 OSBPL5Q9H0X9 879 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-201ENST00000291842 GSDMDP57764 484 aa21.05■□□□□ 0.96
SHKBP1-201ENST00000291842 ZNF827Q17R98 1081 aa21.05■□□□□ 0.96
SHKBP1-201ENST00000291842 PHF20Q9BVI0 1012 aa21.05■□□□□ 0.96
SHKBP1-201ENST00000291842 PRPF3O43395 683 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 SERPINC1P01008 464 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 FGRP09769 529 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 XBP1P17861 261 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 POSTNQ15063 836 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 FANCLQ9NW38 375 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 SRPRBQ9Y5M8 271 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 KRT2P35908 639 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 PPP2R5BQ15173 497 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 ANKIB1Q9P2G1 1089 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 IMPACTQ9P2X3 320 aa21.04■□□□□ 0.96
SHKBP1-201ENST00000291842 USP17L8P0C7I0 530 aa21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 DZIP1Q86YF9 867 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 SRBD1Q8N5C6 995 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 GPR101Q96P66 508 aaPredicted RBP21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 MCM9Q9NXL9 1143 aa21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 MAN1B1Q9UKM7 699 aa21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 UBASH3AP57075 661 aa21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 CEP135Q66GS9 1140 aa21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 CEP131Q9UPN4 1083 aa21.03■□□□□ 0.96
SHKBP1-201ENST00000291842 TRIM75PA6NK02 468 aa21.02■□□□□ 0.96
SHKBP1-201ENST00000291842 VEGFAP15692 232 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-201ENST00000291842 TMTC3Q6ZXV5 915 aa21.02■□□□□ 0.96
SHKBP1-201ENST00000291842 EPSTI1Q96J88 318 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms