RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 AATKQ6ZMQ8 1374 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 ADGRL3Q9HAR2 1447 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 GSTO1P78417 241 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 SATB1Q01826 763 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 PPFIA1Q13136 1202 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 RASA3Q14644 834 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 PHLDB2Q86SQ0 1253 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 MAK16Q9BXY0 300 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 FAM204AQ9H8W3 233 aa11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 UTP11Q9Y3A2 253 aaKnown RBP11.98□□□□□ -0.49
PKNOX1-201ENST00000291547 MAP7Q14244 749 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 PLS1Q14651 629 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 SEC24BO95487 1268 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 AP1ARQ63HQ0 302 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 CYP26C1Q6V0L0 522 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 SND1Q7KZF4 910 aaKnown RBP eCLIP11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 DHX32Q7L7V1 743 aaKnown RBP11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 WHAMMP3Q1A5X7 153 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 HHATQ5VTY9 493 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 PTCH1Q13635 1447 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 SPDYE3A6NKU9 549 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 TRIM14Q14142 442 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 CEP128Q6ZU80 1094 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 PDLIM2Q96JY6 352 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
PKNOX1-201ENST00000291547 VWA3AA6NCI4 1184 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 CRCPO75575 148 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 GCKP35557 465 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 FANCCQ00597 558 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 VWA3BQ502W6 1294 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 ATL3Q6DD88 541 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 LMBR1LQ6UX01 489 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 TAOK1Q7L7X3 1001 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 CROCCP2Q86T23 111 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 RNF10Q8N5U6 811 aaKnown RBP11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 MPHOSPH6Q99547 160 aaKnown RBP11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 PPLO60437 1756 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 TNFAIP3P21580 790 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 TEX13AQ9BXU3 409 aaPredicted RBP11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 KIF13AQ9H1H9 1805 aa11.96□□□□□ -0.49
PKNOX1-201ENST00000291547 RXRAP19793 462 aa11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 ZNF75DP51815 510 aa11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 CTNND2Q9UQB3 1225 aa11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 MORC2Q9Y6X9 1032 aaPredicted RBP11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 E7EVH7 732 aa11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 PAK2Q13177 524 aa11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 NOX5Q96PH1 765 aa11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 PAG1Q9NWQ8 432 aa11.96□□□□□ -0.5
PKNOX1-201ENST00000291547 CEP104O60308 925 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 SNRPA1P09661 255 aaKnown RBP11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 IL2RBP14784 551 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 IL15P40933 162 aaPredicted RBP11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 ANKRD20A3Q5VUR7 823 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 MCTP2Q6DN12 878 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 KLHL7Q8IXQ5 586 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 RNF168Q8IYW5 571 aaPredicted RBP11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 ASIC3Q9UHC3 531 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 AGTPBP1Q9UPW5 1226 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 GNA11P29992 359 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 SLC9C1Q4G0N8 1177 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 CCDC65Q8IXS2 484 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 GBP5Q96PP8 586 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 PSMB7Q99436 277 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 RABGAP1Q9Y3P9 1069 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 MAP3K5Q99683 1374 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 ARHGAP6O43182 974 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 KRT71Q3SY84 523 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 NBPF6Q5VWK0 638 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 RRP36Q96EU6 259 aaKnown RBP11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 NBPF4Q96M43 638 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 SUDS3Q9H7L9 328 aaPredicted RBP11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 RTL9Q8NET4 1388 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 GRM8O00222 908 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 PA2G4Q9UQ80 394 aaKnown RBP11.95□□□□□ -0.5
PKNOX1-201ENST00000291547 RAD50Q92878 1312 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 MAGEA1P43355 309 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 LONRF3Q496Y0 759 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 KIFC2Q96AC6 838 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 DDX21Q9NR30 783 aaKnown RBP eCLIP11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 BTG4Q9NY30 223 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 RRP15Q9Y3B9 282 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 LOC102724159A0A0B4J2E5 919 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 CETN3O15182 167 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 PPFIA4O75335 1185 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 PPP1R2P41236 205 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 PWP2Q15269 919 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 CCDC152Q4G0S7 254 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 MAPK8IP1Q9UQF2 711 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 KRT5P13647 590 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms