RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 NASPP49321 788 aaPredicted RBP19.43■□□□□ 0.7
HIF3A-203ENST00000291300 FUT2Q10981 343 aa19.43■□□□□ 0.7
HIF3A-203ENST00000291300 MYSM1Q5VVJ2 828 aa19.43■□□□□ 0.7
HIF3A-203ENST00000291300 USP17L1Q7RTZ2 530 aa19.43■□□□□ 0.7
HIF3A-203ENST00000291300 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
HIF3A-203ENST00000291300 DACT1Q9NYF0 836 aa19.43■□□□□ 0.7
HIF3A-203ENST00000291300 PCDHAC2Q9Y5I4 1007 aa19.43■□□□□ 0.7
HIF3A-203ENST00000291300 BAZ2BQ9UIF8 2168 aaKnown RBP19.42■□□□□ 0.7
HIF3A-203ENST00000291300 CAMK4Q16566 473 aa19.42■□□□□ 0.7
HIF3A-203ENST00000291300 GOLPH3LQ9H4A5 285 aa19.42■□□□□ 0.7
HIF3A-203ENST00000291300 TTF2Q9UNY4 1162 aaKnown RBP19.42■□□□□ 0.7
HIF3A-203ENST00000291300 MYH1P12882 1939 aa19.42■□□□□ 0.7
HIF3A-203ENST00000291300 MYH6P13533 1939 aa19.42■□□□□ 0.7
HIF3A-203ENST00000291300 ZNF396Q96N95 335 aaPredicted RBP19.42■□□□□ 0.7
HIF3A-203ENST00000291300 FOCADQ5VW36 1801 aa19.41■□□□□ 0.7
HIF3A-203ENST00000291300 GOLGA6L4A6NEF3 574 aa19.41■□□□□ 0.7
HIF3A-203ENST00000291300 CATIPQ7Z7H3 387 aa19.41■□□□□ 0.7
HIF3A-203ENST00000291300 BICD2Q8TD16 824 aa19.41■□□□□ 0.7
HIF3A-203ENST00000291300 TSPY26PQ9H489 355 aa19.41■□□□□ 0.7
HIF3A-203ENST00000291300 SNED1Q8TER0 1413 aa19.41■□□□□ 0.7
HIF3A-203ENST00000291300 RASA1P20936 1047 aa19.4■□□□□ 0.7
HIF3A-203ENST00000291300 RCAN1P53805 252 aa19.4■□□□□ 0.7
HIF3A-203ENST00000291300 MKNK2Q9HBH9 465 aa19.4■□□□□ 0.7
HIF3A-203ENST00000291300 DDX4Q9NQI0 724 aaKnown RBP19.4■□□□□ 0.7
HIF3A-203ENST00000291300 RTEL1Q9NZ71 1219 aa19.4■□□□□ 0.7
HIF3A-203ENST00000291300 ZNF646O15015 1829 aaPredicted RBP19.4■□□□□ 0.7
HIF3A-203ENST00000291300 PKN1Q16512 942 aa19.4■□□□□ 0.7
HIF3A-203ENST00000291300 FUCA2Q9BTY2 467 aa19.4■□□□□ 0.7
HIF3A-203ENST00000291300 TMX4Q9H1E5 349 aaPredicted RBP19.4■□□□□ 0.7
HIF3A-203ENST00000291300 G3V3G9 751 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 PICALMQ13492 652 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 DCAF8Q5TAQ9 597 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 BRAPQ7Z569 592 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 LINC00301Q8NCQ3 95 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.39■□□□□ 0.69
HIF3A-203ENST00000291300 PCDHA7Q9UN72 937 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 CCDC196A0A1B0GTZ2 297 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 BTBD18B2RXH4 712 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 BAG6P46379 1132 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 CDK8P49336 464 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 AOC3Q16853 763 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 RASGRP2Q7LDG7 609 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 TRIM22Q8IYM9 498 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 EYA3Q99504 573 aa19.39■□□□□ 0.69
HIF3A-203ENST00000291300 ECE2O60344 883 aa19.38■□□□□ 0.69
HIF3A-203ENST00000291300 WDHD1O75717 1129 aaPredicted RBP19.38■□□□□ 0.69
HIF3A-203ENST00000291300 DEXIO95424 95 aa19.38■□□□□ 0.69
HIF3A-203ENST00000291300 SLURP2P0DP57 97 aa19.38■□□□□ 0.69
HIF3A-203ENST00000291300 VEGFAP15692 232 aaPredicted RBP19.38■□□□□ 0.69
HIF3A-203ENST00000291300 ATL3Q6DD88 541 aa19.38■□□□□ 0.69
HIF3A-203ENST00000291300 CCAR1Q8IX12 1150 aaKnown RBP19.38■□□□□ 0.69
HIF3A-203ENST00000291300 SLF2Q8IX21 1173 aa19.38■□□□□ 0.69
HIF3A-203ENST00000291300 SRBD1Q8N5C6 995 aaKnown RBP19.38■□□□□ 0.69
HIF3A-203ENST00000291300 OXER1Q8TDS5 423 aa19.38■□□□□ 0.69
HIF3A-203ENST00000291300 V9GY48 417 aaPredicted RBP19.38■□□□□ 0.69
HIF3A-203ENST00000291300 C21orf2O43822 256 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 DDAH1O94760 285 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 MMP1P03956 469 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 PLCG2P16885 1265 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 U2AF2P26368 475 aaKnown RBP eCLIP19.37■□□□□ 0.69
HIF3A-203ENST00000291300 ME1P48163 572 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 TMTC3Q6ZXV5 915 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 CNKSR1Q969H4 720 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 SF3B2Q13435 895 aaKnown RBP19.37■□□□□ 0.69
HIF3A-203ENST00000291300 TRIM29Q14134 588 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 APOBEC3HQ6NTF7 200 aaKnown RBP19.37■□□□□ 0.69
HIF3A-203ENST00000291300 C16orf86Q6ZW13 317 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 KIAA0825Q8IV33 1275 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 CKAP2LQ8IYA6 745 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 NUP62CLQ9H1M0 184 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 POLR3EQ9NVU0 708 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 VPS54Q9P1Q0 977 aa19.37■□□□□ 0.69
HIF3A-203ENST00000291300 TSPY3P0CV98 308 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 TSPY8P0CW00 308 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 NR5A1Q13285 461 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 ANO1Q5XXA6 986 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 CDC42EP5Q6NZY7 148 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 PODNQ7Z5L7 613 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 AMOTL1Q8IY63 956 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 PIBF1Q8WXW3 757 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 RNF26Q9BY78 433 aaPredicted RBP19.36■□□□□ 0.69
HIF3A-203ENST00000291300 SUGT1Q9Y2Z0 365 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 CNTNAP5Q8WYK1 1306 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 C10orf71Q711Q0 1435 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 SNW1Q13573 536 aaKnown RBP19.36■□□□□ 0.69
HIF3A-203ENST00000291300 STK38Q15208 465 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 DIS3L2Q8IYB7 885 aaKnown RBP19.36■□□□□ 0.69
HIF3A-203ENST00000291300 ZNF444Q8N0Y2 327 aaPredicted RBP19.36■□□□□ 0.69
HIF3A-203ENST00000291300 USP40Q9NVE5 1235 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 MTMR7Q9Y216 660 aa19.36■□□□□ 0.69
HIF3A-203ENST00000291300 NFIAQ12857 509 aa19.35■□□□□ 0.69
HIF3A-203ENST00000291300 SF3A1Q15459 793 aaKnown RBP19.35■□□□□ 0.69
HIF3A-203ENST00000291300 DACT2Q5SW24 774 aa19.35■□□□□ 0.69
HIF3A-203ENST00000291300 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
HIF3A-203ENST00000291300 STAG2Q8N3U4 1231 aa19.35■□□□□ 0.69
HIF3A-203ENST00000291300 RGS22Q8NE09 1264 aa19.35■□□□□ 0.69
HIF3A-203ENST00000291300 WASF1Q92558 559 aa19.35■□□□□ 0.69
HIF3A-203ENST00000291300 CLSTN2Q9H4D0 955 aa19.35■□□□□ 0.69
HIF3A-203ENST00000291300 ADAMTS3O15072 1205 aa19.34■□□□□ 0.69
HIF3A-203ENST00000291300 CALM1P0DP23 149 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms