RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 BACE1P56817 501 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 TTC6Q86TZ1 520 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 EHD4Q9H223 541 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 PAG1Q9NWQ8 432 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 ZBTB21Q9ULJ3 1066 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 CDK5RAP2Q96SN8 1893 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 FOCADQ5VW36 1801 aa12.69□□□□□ -0.38
SNF8-201ENST00000290330 MYPNQ86TC9 1320 aa12.68□□□□□ -0.38
SNF8-201ENST00000290330 SMARCA5O60264 1052 aaPredicted RBP12.68□□□□□ -0.38
SNF8-201ENST00000290330 EN2P19622 333 aaPredicted RBP12.68□□□□□ -0.38
SNF8-201ENST00000290330 PLCD1P51178 756 aa12.68□□□□□ -0.38
SNF8-201ENST00000290330 PRKCZQ05513 592 aa12.68□□□□□ -0.38
SNF8-201ENST00000290330 MTMR2Q13614 643 aa12.68□□□□□ -0.38
SNF8-201ENST00000290330 ANKRD13CQ8N6S4 541 aa12.68□□□□□ -0.38
SNF8-201ENST00000290330 RAET1EQ8TD07 263 aa12.68□□□□□ -0.38
SNF8-201ENST00000290330 HAUS7Q99871 368 aa12.68□□□□□ -0.38
SNF8-201ENST00000290330 DCTPP1Q9H773 170 aa12.68□□□□□ -0.38
SNF8-201ENST00000290330 C19orf81C9J6K1 198 aa12.67□□□□□ -0.38
SNF8-201ENST00000290330 USP17L10C9JJH3 530 aa12.67□□□□□ -0.38
SNF8-201ENST00000290330 MYCP01106 439 aaPredicted RBP12.67□□□□□ -0.38
SNF8-201ENST00000290330 NEFLP07196 543 aa12.67□□□□□ -0.38
SNF8-201ENST00000290330 ADD2P35612 726 aa12.67□□□□□ -0.38
SNF8-201ENST00000290330 PABPC4Q13310 644 aaKnown RBP eCLIP12.67□□□□□ -0.382e-8■■■□□ 14.8
SNF8-201ENST00000290330 FAM110CQ1W6H9 321 aa12.67□□□□□ -0.38
SNF8-201ENST00000290330 CRNKL1Q9BZJ0 848 aaKnown RBP12.67□□□□□ -0.38
SNF8-201ENST00000290330 ASCC2Q9H1I8 757 aaPredicted RBP12.67□□□□□ -0.38
SNF8-201ENST00000290330 GABRQQ9UN88 632 aa12.67□□□□□ -0.38
SNF8-201ENST00000290330 CENPFP49454 3210 aa12.67□□□□□ -0.38
SNF8-201ENST00000290330 GH2P01242 217 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
SNF8-201ENST00000290330 GRK4P32298 578 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 GCLCP48506 637 aaPredicted RBP12.66□□□□□ -0.38
SNF8-201ENST00000290330 GABPAQ06546 454 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 SLFNL1Q499Z3 407 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 LCORLQ8N3X6 602 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 SDR42E1Q8WUS8 393 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 DCP1AQ9NPI6 582 aaPredicted RBP12.66□□□□□ -0.38
SNF8-201ENST00000290330 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
SNF8-201ENST00000290330 MCM9Q9NXL9 1143 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 TMOD4Q9NZQ9 345 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 ATAD5Q96QE3 1844 aa12.66□□□□□ -0.38
SNF8-201ENST00000290330 KIAA0100Q14667 2235 aaKnown RBP12.65□□□□□ -0.38
SNF8-201ENST00000290330 TNPO2O14787 897 aaKnown RBP12.65□□□□□ -0.38
SNF8-201ENST00000290330 CHGBP05060 677 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 POLR3DP05423 398 aaPredicted RBP12.65□□□□□ -0.38
SNF8-201ENST00000290330 SHMT1P34896 483 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 FLT3LGP49771 235 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 EVX2Q03828 476 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 UBE3CQ15386 1083 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 MTFR1Q15390 333 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 CERKLQ49MI3 558 aaPredicted RBP12.65□□□□□ -0.38
SNF8-201ENST00000290330 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNF8-201ENST00000290330 ARMT1Q9H993 441 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 LOC285556D6RIA3 1793 aa12.65□□□□□ -0.38
SNF8-201ENST00000290330 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
SNF8-201ENST00000290330 MBD4O95243 580 aa12.64□□□□□ -0.39
SNF8-201ENST00000290330 IRX3P78415 501 aaPredicted RBP12.64□□□□□ -0.39
SNF8-201ENST00000290330 ABCB5Q2M3G0 1257 aa12.64□□□□□ -0.39
SNF8-201ENST00000290330 PRPF38BQ5VTL8 546 aaKnown RBP12.64□□□□□ -0.39
SNF8-201ENST00000290330 P2RX7Q99572 595 aaKnown RBP12.64□□□□□ -0.39
SNF8-201ENST00000290330 PCDHB15Q9Y5E8 787 aa12.64□□□□□ -0.39
SNF8-201ENST00000290330 BRCA2P51587 3418 aa12.64□□□□□ -0.39
SNF8-201ENST00000290330 MYH1P12882 1939 aa12.64□□□□□ -0.39
SNF8-201ENST00000290330 PRKAB2O43741 272 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 ADCY3O60266 1144 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 GUCY1A2P33402 732 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 RRP1P56182 461 aaKnown RBP12.63□□□□□ -0.39
SNF8-201ENST00000290330 IRF5Q13568 498 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 SLAIN1Q8ND83 568 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 COA7Q96BR5 231 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 C12orf42Q96LP6 360 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 CABP5Q9NP86 173 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 ATP8A2Q9NTI2 1148 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 MORF4L1Q9UBU8 362 aa12.63□□□□□ -0.39
SNF8-201ENST00000290330 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
SNF8-201ENST00000290330 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
SNF8-201ENST00000290330 PDE4DIPQ5VU43 2346 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 CYP2D6P10635 497 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 ELNP15502 786 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 HERVK_113P62684 666 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 UBXN2AP68543 259 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
SNF8-201ENST00000290330 ZSCAN25Q6NSZ9 544 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 ACER1Q8TDN7 264 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 FEZ1Q99689 392 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 PUS7LQ9H0K6 701 aaKnown RBP12.62□□□□□ -0.39
SNF8-201ENST00000290330 TXNRD2Q9NNW7 524 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 RBPJLQ9UBG7 517 aa12.62□□□□□ -0.39
SNF8-201ENST00000290330 PEX10O60683 326 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 GJB1P08034 283 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 338.6 ms