RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 MYH8P13535 1937 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.52
C9orf43-201ENST00000288462 TPRNQ4KMQ1 711 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 RCSD1Q6JBY9 416 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 TEX11Q8IYF3 940 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 ZNF622Q969S3 477 aaKnown RBP eCLIP11.81□□□□□ -0.52
C9orf43-201ENST00000288462 TMX4Q9H1E5 349 aaPredicted RBP11.81□□□□□ -0.52
C9orf43-201ENST00000288462 NUP62CLQ9H1M0 184 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 TSPY2A6NKD2 308 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 NMT2O60551 498 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 GUCY1A2P33402 732 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 CEBPZQ03701 1054 aaKnown RBP11.81□□□□□ -0.52
C9orf43-201ENST00000288462 TRIM29Q14134 588 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 FAM47AQ5JRC9 791 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 RBM43Q6ZSC3 357 aaKnown RBP11.81□□□□□ -0.52
C9orf43-201ENST00000288462 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 BICD2Q8TD16 824 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 ANKS1AQ92625 1134 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 CLSTN2Q9H4D0 955 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 DACT1Q9NYF0 836 aa11.81□□□□□ -0.52
C9orf43-201ENST00000288462 POLR3DP05423 398 aaPredicted RBP11.8□□□□□ -0.52
C9orf43-201ENST00000288462 TMTC3Q6ZXV5 915 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 LINC00301Q8NCQ3 95 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 DYNLL2Q96FJ2 89 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 TCP11L1Q9NUJ3 509 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 CLIC4Q9Y696 253 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 MMP1P03956 469 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 PLCD1P51178 756 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 SLC4A8Q2Y0W8 1093 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 C16orf86Q6ZW13 317 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 KCNG4Q8TDN1 519 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 CNKSR1Q969H4 720 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 PPP1R9BQ96SB3 815 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 CNTNAP5Q8WYK1 1306 aa11.8□□□□□ -0.52
C9orf43-201ENST00000288462 PRPF3O43395 683 aaKnown RBP11.79□□□□□ -0.52
C9orf43-201ENST00000288462 NR1I2O75469 434 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 PLEKHA8P1O95397 391 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 RASA1P20936 1047 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 FKBP1AP62942 108 aaKnown RBP11.79□□□□□ -0.52
C9orf43-201ENST00000288462 TFAP4Q01664 338 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 CCDC173Q0VFZ6 552 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 CCDC178Q5BJE1 867 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 ANO1Q5XXA6 986 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 PODNQ7Z5L7 613 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 DGKHQ86XP1 1220 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 CMTR1Q8N1G2 835 aaKnown RBP11.79□□□□□ -0.52
C9orf43-201ENST00000288462 FBXO41Q8TF61 875 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.79□□□□□ -0.52
C9orf43-201ENST00000288462 IL17RBQ9NRM6 502 aa11.79□□□□□ -0.52
C9orf43-201ENST00000288462 SAP30BPQ9UHR5 308 aaKnown RBP11.79□□□□□ -0.52
C9orf43-201ENST00000288462 GREB1LQ9C091 1923 aaPredicted RBP11.79□□□□□ -0.52
C9orf43-201ENST00000288462 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 CHRNA5P30532 468 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 STK38Q15208 465 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 PKN1Q16512 942 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 GOLPH3LQ9H4A5 285 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 ZNF287Q9HBT7 754 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 PCDHA7Q9UN72 937 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 SIPA1L1O43166 1804 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 PLIN4Q96Q06 1357 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 BAG6P46379 1132 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 ME1P48163 572 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 ADALQ6DHV7 355 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 HHIPL2Q6UWX4 724 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
C9orf43-201ENST00000288462 ENGASEQ8NFI3 743 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
C9orf43-201ENST00000288462 FBXW7Q969H0 707 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 SHISA4Q96DD7 197 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 TNMDQ9H2S6 317 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
C9orf43-201ENST00000288462 MKNK2Q9HBH9 465 aa11.78□□□□□ -0.52
C9orf43-201ENST00000288462 TTF2Q9UNY4 1162 aaKnown RBP11.78□□□□□ -0.52
C9orf43-201ENST00000288462 SPTLC2O15270 562 aa11.77□□□□□ -0.52
C9orf43-201ENST00000288462 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.52
C9orf43-201ENST00000288462 SLC39A14Q15043 492 aa11.77□□□□□ -0.52
C9orf43-201ENST00000288462 SAFBQ15424 915 aaKnown RBP eCLIP11.77□□□□□ -0.52
C9orf43-201ENST00000288462 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.52
C9orf43-201ENST00000288462 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.52
C9orf43-201ENST00000288462 DIS3L2Q8IYB7 885 aaKnown RBP11.77□□□□□ -0.52
C9orf43-201ENST00000288462 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.52
C9orf43-201ENST00000288462 CDK8P49336 464 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 SNW1Q13573 536 aaKnown RBP11.77□□□□□ -0.53
C9orf43-201ENST00000288462 GNL2Q13823 731 aaKnown RBP11.77□□□□□ -0.53
C9orf43-201ENST00000288462 PTPAQ15257 358 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 CCDC82Q8N4S0 544 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 FSIP1Q8NA03 581 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 RNF214Q8ND24 703 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.53
C9orf43-201ENST00000288462 PDLIM2Q96JY6 352 aa11.77□□□□□ -0.53
C9orf43-201ENST00000288462 MXD3Q9BW11 206 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms