RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 AFG3L2Q9Y4W6 797 aa23.76■■□□□ 1.39
TIMP4-201ENST00000287814 CDK8P49336 464 aa23.75■■□□□ 1.39
TIMP4-201ENST00000287814 CERKLQ49MI3 558 aaPredicted RBP23.75■■□□□ 1.39
TIMP4-201ENST00000287814 C16orf86Q6ZW13 317 aa23.75■■□□□ 1.39
TIMP4-201ENST00000287814 AMOTL1Q8IY63 956 aa23.75■■□□□ 1.39
TIMP4-201ENST00000287814 STK11IPQ8N1F8 1099 aa23.75■■□□□ 1.39
TIMP4-201ENST00000287814 NAPBQ9H115 298 aa23.75■■□□□ 1.39
TIMP4-201ENST00000287814 KCNH4Q9UQ05 1017 aa23.75■■□□□ 1.39
TIMP4-201ENST00000287814 DOCK1Q14185 1865 aa23.74■■□□□ 1.39
TIMP4-201ENST00000287814 TESPA1A2RU30 521 aaPredicted RBP23.74■■□□□ 1.39
TIMP4-201ENST00000287814 GH2P01242 217 aa23.74■■□□□ 1.39
TIMP4-201ENST00000287814 BMP2KLQ5H9B9 411 aa23.74■■□□□ 1.39
TIMP4-201ENST00000287814 BRI3BPQ8WY22 251 aa23.74■■□□□ 1.39
TIMP4-201ENST00000287814 ZBTB21Q9ULJ3 1066 aa23.74■■□□□ 1.39
TIMP4-201ENST00000287814 IGF2BP3O00425 579 aaKnown RBP eCLIP23.73■■□□□ 1.39
TIMP4-201ENST00000287814 GTF2A2P52657 109 aa23.73■■□□□ 1.39
TIMP4-201ENST00000287814 REM2Q8IYK8 340 aaPredicted RBP23.73■■□□□ 1.39
TIMP4-201ENST00000287814 SWAP70Q9UH65 585 aa23.73■■□□□ 1.39
TIMP4-201ENST00000287814 FGAP02671 866 aa23.73■■□□□ 1.39
TIMP4-201ENST00000287814 ASNSP08243 561 aa23.73■■□□□ 1.39
TIMP4-201ENST00000287814 SREBF2Q12772 1141 aa23.73■■□□□ 1.39
TIMP4-201ENST00000287814 ALX1Q15699 326 aa23.73■■□□□ 1.39
TIMP4-201ENST00000287814 RNF186Q9NXI6 227 aa23.73■■□□□ 1.39
TIMP4-201ENST00000287814 CCL15-CCL14A0A0B4J2E2 113 aa23.72■■□□□ 1.39
TIMP4-201ENST00000287814 FOXN1O15353 648 aa23.72■■□□□ 1.39
TIMP4-201ENST00000287814 GUCY1A2P33402 732 aa23.72■■□□□ 1.39
TIMP4-201ENST00000287814 INHBEP58166 350 aa23.72■■□□□ 1.39
TIMP4-201ENST00000287814 SNAPC2Q13487 334 aa23.72■■□□□ 1.39
TIMP4-201ENST00000287814 CCL15Q16663 113 aa23.72■■□□□ 1.39
TIMP4-201ENST00000287814 ABCB5Q2M3G0 1257 aa23.72■■□□□ 1.39
TIMP4-201ENST00000287814 IFNL1Q8IU54 200 aa23.72■■□□□ 1.39
TIMP4-201ENST00000287814 TRIM75PA6NK02 468 aa23.71■■□□□ 1.39
TIMP4-201ENST00000287814 USP17L5A8MUK1 530 aa23.71■■□□□ 1.39
TIMP4-201ENST00000287814 MOGSQ13724 837 aa23.71■■□□□ 1.39
TIMP4-201ENST00000287814 TSKSQ9UJT2 592 aa23.71■■□□□ 1.39
TIMP4-201ENST00000287814 ROBO3Q96MS0 1386 aa23.71■■□□□ 1.39
TIMP4-201ENST00000287814 PHIPQ8WWQ0 1821 aa23.71■■□□□ 1.39
TIMP4-201ENST00000287814 CXCL11O14625 94 aa23.7■■□□□ 1.39
TIMP4-201ENST00000287814 TRPA1O75762 1119 aa23.7■■□□□ 1.39
TIMP4-201ENST00000287814 MFAP1P55081 439 aaKnown RBP23.7■■□□□ 1.39
TIMP4-201ENST00000287814 PPARAQ07869 468 aa23.7■■□□□ 1.39
TIMP4-201ENST00000287814 SPP2Q13103 211 aa23.7■■□□□ 1.39
TIMP4-201ENST00000287814 GINM1Q9NU53 330 aa23.7■■□□□ 1.39
TIMP4-201ENST00000287814 TAOK2Q9UL54 1235 aa23.7■■□□□ 1.39
TIMP4-201ENST00000287814 ATAD5Q96QE3 1844 aa23.7■■□□□ 1.38
TIMP4-201ENST00000287814 LAMB1P07942 1786 aa23.7■■□□□ 1.38
TIMP4-201ENST00000287814 CETPP11597 493 aa23.7■■□□□ 1.38
TIMP4-201ENST00000287814 AKR1B1P15121 316 aa23.7■■□□□ 1.38
TIMP4-201ENST00000287814 BEGAINQ9BUH8 593 aa23.7■■□□□ 1.38
TIMP4-201ENST00000287814 TACC3Q9Y6A5 838 aa23.7■■□□□ 1.38
TIMP4-201ENST00000287814 FAM43AQ8N2R8 423 aa23.69■■□□□ 1.38
TIMP4-201ENST00000287814 ZNF280CQ8ND82 737 aa23.69■■□□□ 1.38
TIMP4-201ENST00000287814 WDR18Q9BV38 432 aa23.69■■□□□ 1.38
TIMP4-201ENST00000287814 INCENPQ9NQS7 918 aa23.69■■□□□ 1.38
TIMP4-201ENST00000287814 PRDM1O75626 825 aa23.68■■□□□ 1.38
TIMP4-201ENST00000287814 RASA1P20936 1047 aa23.68■■□□□ 1.38
TIMP4-201ENST00000287814 CTDSPL2Q05D32 466 aa23.68■■□□□ 1.38
TIMP4-201ENST00000287814 SEPT2Q15019 361 aa23.68■■□□□ 1.38
TIMP4-201ENST00000287814 RAB3GAP1Q15042 981 aa23.68■■□□□ 1.38
TIMP4-201ENST00000287814 A0A0G2JLL6 359 aaPredicted RBP23.67■■□□□ 1.38
TIMP4-201ENST00000287814 BTBD19C9JJ37 291 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 MPHOSPH10O00566 681 aaKnown RBP23.67■■□□□ 1.38
TIMP4-201ENST00000287814 SGSM2O43147 1006 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 DGKZQ13574 1117 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 PRRT2Q7Z6L0 340 aaPredicted RBP23.67■■□□□ 1.38
TIMP4-201ENST00000287814 RUFY2Q8WXA3 655 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 CABP5Q9NP86 173 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 RAD50Q92878 1312 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.67■■□□□ 1.38
TIMP4-201ENST00000287814 R3HDMLQ9H3Y0 253 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 MKNK2Q9HBH9 465 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 ANAPC4Q9UJX5 808 aa23.67■■□□□ 1.38
TIMP4-201ENST00000287814 ZMYM6O95789 1325 aa23.66■■□□□ 1.38
TIMP4-201ENST00000287814 GPAT2Q6NUI2 795 aa23.66■■□□□ 1.38
TIMP4-201ENST00000287814 CLEC10AQ8IUN9 316 aa23.66■■□□□ 1.38
TIMP4-201ENST00000287814 ACER1Q8TDN7 264 aa23.66■■□□□ 1.38
TIMP4-201ENST00000287814 CCDC17Q96LX7 622 aa23.66■■□□□ 1.38
TIMP4-201ENST00000287814 DSCC1Q9BVC3 393 aa23.66■■□□□ 1.38
TIMP4-201ENST00000287814 AS3MTQ9HBK9 375 aa23.66■■□□□ 1.38
TIMP4-201ENST00000287814 SAGE1Q9NXZ1 904 aa23.66■■□□□ 1.38
TIMP4-201ENST00000287814 CA12O43570 354 aa23.65■■□□□ 1.38
TIMP4-201ENST00000287814 TBC1D8O95759 1140 aa23.65■■□□□ 1.38
TIMP4-201ENST00000287814 HSPA8P11142 646 aaKnown RBP23.65■■□□□ 1.38
TIMP4-201ENST00000287814 HAND2P61296 217 aa23.65■■□□□ 1.38
TIMP4-201ENST00000287814 PTH1RQ03431 593 aa23.65■■□□□ 1.38
TIMP4-201ENST00000287814 SIAH1Q8IUQ4 282 aa23.65■■□□□ 1.38
TIMP4-201ENST00000287814 TBC1D2Q9BYX2 928 aa23.65■■□□□ 1.38
TIMP4-201ENST00000287814 NBPF3Q9H094 633 aa23.65■■□□□ 1.38
TIMP4-201ENST00000287814 HMGCS2P54868 508 aa23.64■■□□□ 1.38
TIMP4-201ENST00000287814 MTMR2Q13614 643 aa23.64■■□□□ 1.38
TIMP4-201ENST00000287814 TMEM179Q6ZVK1 233 aa23.64■■□□□ 1.38
TIMP4-201ENST00000287814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.64■■□□□ 1.38
TIMP4-201ENST00000287814 BACE1P56817 501 aa23.64■■□□□ 1.37
TIMP4-201ENST00000287814 A0A1W2PRG0 241 aa23.63■■□□□ 1.37
TIMP4-201ENST00000287814 CTCFP49711 727 aaPredicted RBP23.63■■□□□ 1.37
TIMP4-201ENST00000287814 LBX1P52954 281 aa23.63■■□□□ 1.37
TIMP4-201ENST00000287814 SH3D19Q5HYK7 790 aa23.63■■□□□ 1.37
TIMP4-201ENST00000287814 OTUD7BQ6GQQ9 843 aa23.63■■□□□ 1.37
TIMP4-201ENST00000287814 GADL1Q6ZQY3 521 aa23.63■■□□□ 1.37
TIMP4-201ENST00000287814 ESYT1Q9BSJ8 1104 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms