RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
USP25-201ENST00000285679 RNF40O75150 1001 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 RDXP35241 583 aaKnown RBP17.3■□□□□ 0.36
USP25-201ENST00000285679 CCDC96Q2M329 555 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 PAXIP1Q6ZW49 1069 aaPredicted RBP17.3■□□□□ 0.36
USP25-201ENST00000285679 USP49Q70CQ1 688 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 CTAGE1Q96RT6 745 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 MBD4O95243 580 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 MCM7P33993 719 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 CCT5P48643 541 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 FOXR1Q6PIV2 292 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 TC2NQ8N9U0 490 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 CSRNP2Q9H175 543 aa17.3■□□□□ 0.36
USP25-201ENST00000285679 ADAMTSL3P82987 1691 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 ATP8B1O43520 1251 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 SCARF1Q14162 830 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 SRLQ86TD4 932 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 PLBD2Q8NHP8 589 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 ZRANB2O95218 330 aaKnown RBP eCLIP17.29■□□□□ 0.36
USP25-201ENST00000285679 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.29■□□□□ 0.36
USP25-201ENST00000285679 MYO6Q9UM54 1294 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 STIM1Q13586 685 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 FCHSD1Q86WN1 690 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 FAM76AQ8TAV0 307 aa17.29■□□□□ 0.36
USP25-201ENST00000285679 ZNF532Q9HCE3 1301 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 NLRP5P59047 1200 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 SPA17Q15506 151 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
USP25-201ENST00000285679 PNKPQ96T60 521 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 HDAC6Q9UBN7 1215 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 LUC7L2Q9Y383 392 aaKnown RBP17.28■□□□□ 0.36
USP25-201ENST00000285679 SLC4A4Q9Y6R1 1079 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 ZPR1O75312 459 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 IDEP14735 1019 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 MTIF2P46199 727 aaKnown RBP17.28■□□□□ 0.36
USP25-201ENST00000285679 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
USP25-201ENST00000285679 GOLGA6CA6NDK9 693 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 EIF3CLB5ME19 914 aaKnown RBP17.28■□□□□ 0.36
USP25-201ENST00000285679 GOLGA6DP0CG33 693 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 EVA1CP58658 441 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 RAD9BQ6WBX8 426 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 EIF3CQ99613 913 aaKnown RBP17.28■□□□□ 0.36
USP25-201ENST00000285679 GOLGA6AQ9NYA3 693 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 TFR2Q9UP52 801 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
USP25-201ENST00000285679 SND1Q7KZF4 910 aaKnown RBP eCLIP17.27■□□□□ 0.36
USP25-201ENST00000285679 CYB5R4Q7L1T6 521 aa17.27■□□□□ 0.36
USP25-201ENST00000285679 BCCIPQ9P287 314 aaKnown RBP eCLIP17.27■□□□□ 0.36
USP25-201ENST00000285679 TRMT112Q9UI30 125 aaKnown RBP17.27■□□□□ 0.36
USP25-201ENST00000285679 CCDC47Q96A33 483 aaKnown RBP17.27■□□□□ 0.36
USP25-201ENST00000285679 JRKLQ9Y4A0 524 aa17.27■□□□□ 0.36
USP25-201ENST00000285679 SAMM50Q9Y512 469 aa17.27■□□□□ 0.36
USP25-201ENST00000285679 ODF2Q5BJF6 829 aa17.27■□□□□ 0.35
USP25-201ENST00000285679 PPM1EQ8WY54 764 aa17.27■□□□□ 0.35
USP25-201ENST00000285679 ZHX3Q9H4I2 956 aa17.27■□□□□ 0.35
USP25-201ENST00000285679 ADGRG1Q9Y653 693 aa17.27■□□□□ 0.35
USP25-201ENST00000285679 PPP6R2O75170 966 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 SSBP05455 408 aaKnown RBP eCLIP17.26■□□□□ 0.35
USP25-201ENST00000285679 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
USP25-201ENST00000285679 FOXP4Q8IVH2 680 aaPredicted RBP17.26■□□□□ 0.35
USP25-201ENST00000285679 UIMC1Q96RL1 719 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 ERBB3P21860 1342 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 V9GY48 417 aaPredicted RBP17.26■□□□□ 0.35
USP25-201ENST00000285679 RESP18Q5W5W9 173 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 CYP26C1Q6V0L0 522 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 TBC1D10CQ8IV04 446 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 NOA1Q8NC60 698 aaKnown RBP17.26■□□□□ 0.35
USP25-201ENST00000285679 TRIM10Q9UDY6 481 aa17.26■□□□□ 0.35
USP25-201ENST00000285679 ZNF142P52746 1687 aaPredicted RBP17.25■□□□□ 0.35
USP25-201ENST00000285679 PXDNLA1KZ92 1463 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 GUCY1A2P33402 732 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 PLCD1P51178 756 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 TDRD12Q587J7 1177 aaKnown RBP17.25■□□□□ 0.35
USP25-201ENST00000285679 IFT81Q8WYA0 676 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 JAG2Q9Y219 1238 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 SNAP23O00161 211 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 PTPROQ16827 1216 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 TMTC1Q8IUR5 882 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 BCAS4Q8TDM0 211 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 GOLGA6BA6NDN3 693 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 KCTD16Q68DU8 428 aa17.25■□□□□ 0.35
USP25-201ENST00000285679 AKR1B10O60218 316 aa17.24■□□□□ 0.35
USP25-201ENST00000285679 ATF3P18847 181 aa17.24■□□□□ 0.35
USP25-201ENST00000285679 KRT86O43790 486 aa17.24■□□□□ 0.35
USP25-201ENST00000285679 MYO1BO43795 1136 aa17.24■□□□□ 0.35
USP25-201ENST00000285679 ANTXR2P58335 489 aa17.24■□□□□ 0.35
USP25-201ENST00000285679 HLTFQ14527 1009 aaKnown RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms