RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 IFIT3O14879 490 aaKnown RBP22.25■■□□□ 1.15
PDLIM3-202ENST00000284770 TMX3Q96JJ7 454 aa22.25■■□□□ 1.15
PDLIM3-202ENST00000284770 UBAC1Q9BSL1 405 aa22.25■■□□□ 1.15
PDLIM3-202ENST00000284770 GPHNQ9NQX3 736 aaPredicted RBP22.25■■□□□ 1.15
PDLIM3-202ENST00000284770 HERC5Q9UII4 1024 aaKnown RBP22.25■■□□□ 1.15
PDLIM3-202ENST00000284770 SIPA1L1O43166 1804 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 POTECB2RU33 542 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 TSPY3P0CV98 308 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 TSPY8P0CW00 308 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 TMEM67Q5HYA8 995 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 TEPSINQ96N21 525 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 ZSCAN10Q96SZ4 725 aaPredicted RBP22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 ZKSCAN3Q9BRR0 538 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 TPCN1Q9ULQ1 816 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 WDR90Q96KV7 1748 aa22.24■■□□□ 1.15
PDLIM3-202ENST00000284770 ERICH2A1L162 156 aa22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 SLURP2P0DP57 97 aa22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 LIFRP42702 1097 aa22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 TATDN1Q6P1N9 297 aa22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 CDAN1Q8IWY9 1227 aa22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 SPRYD3Q8NCJ5 442 aa22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 ZSCAN31Q96LW9 406 aaPredicted RBP22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 TAF1DQ9H5J8 278 aaPredicted RBP22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 SCN4AP35499 1836 aa22.23■■□□□ 1.15
PDLIM3-202ENST00000284770 TBC1D12O60347 775 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 EVCP57679 992 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 LY9Q9HBG7 655 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 TCP11L1Q9NUJ3 509 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 TNKSO95271 1327 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 FAM196BA6NMK8 535 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 APOBRQ0VD83 1088 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 TMTC2Q8N394 836 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 NEDD1Q8NHV4 660 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 ZC3H15Q8WU90 426 aaKnown RBP22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 PPP2R3BQ9Y5P8 575 aa22.22■■□□□ 1.15
PDLIM3-202ENST00000284770 MAP3K10Q02779 954 aa22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 WTAPQ15007 396 aa22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 SEC23AQ15436 765 aa22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 ME3Q16798 604 aa22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 PNMA8AQ86V59 439 aaPredicted RBP22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 SGMS1Q86VZ5 419 aa22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 DCPSQ96C86 337 aaKnown RBP22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 CCDC17Q96LX7 622 aa22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 SH2B1Q9NRF2 756 aaPredicted RBP22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 IL17RBQ9NRM6 502 aa22.21■■□□□ 1.15
PDLIM3-202ENST00000284770 NMT2O60551 498 aa22.2■■□□□ 1.14
PDLIM3-202ENST00000284770 CCDC178Q5BJE1 867 aa22.2■■□□□ 1.14
PDLIM3-202ENST00000284770 ENAHQ8N8S7 591 aaPredicted RBP22.2■■□□□ 1.14
PDLIM3-202ENST00000284770 SLKQ9H2G2 1235 aaPredicted RBP22.2■■□□□ 1.14
PDLIM3-202ENST00000284770 CERKLQ49MI3 558 aaPredicted RBP22.2■■□□□ 1.14
PDLIM3-202ENST00000284770 ZNF274Q96GC6 653 aaPredicted RBP22.2■■□□□ 1.14
PDLIM3-202ENST00000284770 SENP2Q9HC62 589 aa22.2■■□□□ 1.14
PDLIM3-202ENST00000284770 BRPF3Q9ULD4 1205 aa22.2■■□□□ 1.14
PDLIM3-202ENST00000284770 PLIN4Q96Q06 1357 aa22.19■■□□□ 1.14
PDLIM3-202ENST00000284770 LARGE1O95461 756 aa22.19■■□□□ 1.14
PDLIM3-202ENST00000284770 AKR1B1P15121 316 aa22.19■■□□□ 1.14
PDLIM3-202ENST00000284770 DDIT3P35638 169 aa22.19■■□□□ 1.14
PDLIM3-202ENST00000284770 CUL4AQ13619 759 aa22.19■■□□□ 1.14
PDLIM3-202ENST00000284770 MIGA2Q7L4E1 593 aa22.19■■□□□ 1.14
PDLIM3-202ENST00000284770 NFXL1Q6ZNB6 911 aa22.18■■□□□ 1.14
PDLIM3-202ENST00000284770 DGKHQ86XP1 1220 aa22.18■■□□□ 1.14
PDLIM3-202ENST00000284770 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.18■■□□□ 1.14
PDLIM3-202ENST00000284770 KLF18A0A0U1RQI7 1052 aa22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 CCDC69A6NI79 296 aa22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 PDIA3P30101 505 aaKnown RBP22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 EAPPQ56P03 285 aaPredicted RBP22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 IFIT1BQ5T764 474 aaKnown RBP22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 NBPF12Q5TAG4 269 aaPredicted RBP22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 SULF1Q8IWU6 871 aa22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 ANKS1AQ92625 1134 aa22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 HOOK2Q96ED9 719 aa22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 HSP90AA1P07900 732 aaKnown RBP22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 VEGFAP15692 232 aaPredicted RBP22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 RCSD1Q6JBY9 416 aa22.17■■□□□ 1.14
PDLIM3-202ENST00000284770 IGKV6D-41A0A0C4DH26 115 aa22.16■■□□□ 1.14
PDLIM3-202ENST00000284770 MPHOSPH10O00566 681 aaKnown RBP22.16■■□□□ 1.14
PDLIM3-202ENST00000284770 APOA5Q6Q788 366 aa22.16■■□□□ 1.14
PDLIM3-202ENST00000284770 RRAGCQ9HB90 399 aa22.16■■□□□ 1.14
PDLIM3-202ENST00000284770 NAP1L2Q9ULW6 460 aaPredicted RBP22.16■■□□□ 1.14
PDLIM3-202ENST00000284770 SLC12A7Q9Y666 1083 aa22.16■■□□□ 1.14
PDLIM3-202ENST00000284770 PFKFB2O60825 505 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 NOVP48745 357 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 STK3Q13188 491 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 ABCB5Q2M3G0 1257 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 PRAMEF18Q5VWM3 479 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 KRT26Q7Z3Y9 468 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 NECAB1Q8N987 351 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 CEP95Q96GE4 821 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 FOXD4L1Q9NU39 408 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 MYH8P13535 1937 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 RRP1BQ14684 758 aaKnown RBP22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 SUPT20HL1Q3ZLR7 823 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 DCAF15Q66K64 600 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 MTMR4Q9NYA4 1195 aa22.15■■□□□ 1.14
PDLIM3-202ENST00000284770 GOLGA8BA8MQT2 603 aa22.14■■□□□ 1.13
PDLIM3-202ENST00000284770 GDF11O95390 407 aa22.14■■□□□ 1.13
PDLIM3-202ENST00000284770 SYNE3Q6ZMZ3 975 aa22.14■■□□□ 1.13
PDLIM3-202ENST00000284770 TMEM179Q6ZVK1 233 aa22.14■■□□□ 1.13
PDLIM3-202ENST00000284770 GTF3C6Q969F1 213 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms