RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCDC82Q8N4S0 544 aa21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 AKT1S1Q96B36 256 aa21.09■□□□□ 0.97
PDLIM3-201ENST00000284767 NTRK3Q16288 839 aa21.08■□□□□ 0.97
PDLIM3-201ENST00000284767 DCP1AQ9NPI6 582 aaPredicted RBP21.08■□□□□ 0.97
PDLIM3-201ENST00000284767 KIF28PB7ZC32 967 aa21.08■□□□□ 0.96
PDLIM3-201ENST00000284767 ME1P48163 572 aa21.08■□□□□ 0.96
PDLIM3-201ENST00000284767 WTAPQ15007 396 aa21.08■□□□□ 0.96
PDLIM3-201ENST00000284767 FBXO18Q8NFZ0 1043 aa21.08■□□□□ 0.96
PDLIM3-201ENST00000284767 BRIP1Q9BX63 1249 aa21.08■□□□□ 0.96
PDLIM3-201ENST00000284767 DHX8Q14562 1220 aaKnown RBP21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 AOPEPQ8N6M6 819 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 MRPS27Q92552 414 aaKnown RBP21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 RNF41Q9H4P4 317 aaPredicted RBP21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 ANAPC4Q9UJX5 808 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 GGA1Q9UJY5 639 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 MYH2Q9UKX2 1941 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 PLSCR1O15162 318 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 LDHBP07195 334 aaKnown RBP21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 TAF3Q5VWG9 929 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 ZNF804AQ7Z570 1209 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 BPIFA3Q9BQP9 254 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 CD209Q9NNX6 404 aa21.07■□□□□ 0.96
PDLIM3-201ENST00000284767 A0A1W2PQ27 194 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 A0A1W2PQ64 194 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 A0A1W2PQD8 194 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 FMR1NBQ8N0W7 255 aaPredicted RBP21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 KRT222Q8N1A0 295 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 TNKSO95271 1327 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 SLU7O95391 586 aaKnown RBP21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 KMT5BQ4FZB7 885 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 ADALQ6DHV7 355 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 ZNF771Q7L3S4 317 aaPredicted RBP21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 NUP133Q8WUM0 1156 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 ALG1Q9BT22 464 aa21.06■□□□□ 0.96
PDLIM3-201ENST00000284767 C6orf229H3BNL8 230 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 HOXA10P31260 410 aaPredicted RBP21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 TBC1D16Q8TBP0 767 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 UBAC1Q9BSL1 405 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 CRNKL1Q9BZJ0 848 aaKnown RBP21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 RTEL1Q9NZ71 1219 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 USP17L8P0C7I0 530 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 RXRBP28702 533 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 CCDC150Q8NCX0 1101 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 WDR66Q8TBY9 1149 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 ESR2Q92731 530 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 FAM53CQ9NYF3 392 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
PDLIM3-201ENST00000284767 ERICH2A1L162 156 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 NMT2O60551 498 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 BBOX1O75936 387 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 MMP10P09238 476 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 GUCY1A2P33402 732 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 KCNJ6P48051 423 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 SART3Q15020 963 aaKnown RBP21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 NBPF11Q86T75 865 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 SH3RF3Q8TEJ3 882 aaPredicted RBP21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 SLC26A6Q9BXS9 759 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 TRMT1Q9NXH9 659 aaKnown RBP21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 PCDHA7Q9UN72 937 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 RIMBP2O15034 1052 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 IARSP41252 1262 aaKnown RBP21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 ANKRD31Q8N7Z5 1873 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 DUOX1Q9NRD9 1551 aa21.04■□□□□ 0.96
PDLIM3-201ENST00000284767 KLRG2A4D1S0 409 aaPredicted RBP21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 TUBB4AP04350 444 aa21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 ATP2B4P23634 1241 aa21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 SEC23AQ15436 765 aa21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 FAM47AQ5JRC9 791 aa21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 SPTY2D1Q68D10 685 aaPredicted RBP21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 ENAHQ8N8S7 591 aaPredicted RBP21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 ZNF654Q8IZM8 581 aa21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 CRAMP1Q96RY5 1269 aa21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 MCM9Q9NXL9 1143 aa21.03■□□□□ 0.96
PDLIM3-201ENST00000284767 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 SLFN14P0C7P3 912 aa21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 ZRSR1Q15695 479 aaKnown RBP21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 SYNE3Q6ZMZ3 975 aa21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 NLGN1Q8N2Q7 840 aa21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 CLIC4Q9Y696 253 aa21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 PSDA5PKW4 1024 aaPredicted RBP21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 IGSF3O75054 1194 aa21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 KIF23Q02241 960 aaPredicted RBP21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 KRT40Q6A162 431 aa21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 L2HGDHQ9H9P8 463 aa21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 KIAA1468Q9P260 1216 aa21.02■□□□□ 0.96
PDLIM3-201ENST00000284767 A0A087WWV3 80 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 CDKL5O76039 1030 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 ELF2Q15723 593 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 RTN1Q16799 776 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 FBXO38Q6PIJ6 1188 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 CPLX2Q6PUV4 134 aaKnown RBP21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 C15orf52Q6ZUT6 534 aaKnown RBP21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 ZSCAN10Q96SZ4 725 aaPredicted RBP21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 MAST2Q6P0Q8 1798 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 SRGNP10124 158 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 KCNG4Q8TDN1 519 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 ATP8A2Q9NTI2 1148 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 ECM29Q5VYK3 1845 aa21.01■□□□□ 0.95
PDLIM3-201ENST00000284767 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms