RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CARMIL1Q5VZK9 1371 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 TRBV23-1A0A0A0MS06 115 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 B4E1Z4 1266 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 GHRHP01286 108 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 CDC25BP30305 580 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 NR5A1Q13285 461 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 PIN1Q13526 163 aaPredicted RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 TOMM20Q15388 145 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 FAAH2Q6GMR7 532 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 CREBRFQ8IUR6 639 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 CAMKK1Q8N5S9 505 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 ATP6V1E2Q96A05 226 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 C1QTNF2Q9BXJ5 285 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 CDH19Q9H159 772 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 THRAP3Q9Y2W1 955 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 FAM153BP0C7A2 387 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 CDKN1CP49918 316 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 CBLBQ13191 982 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 PABPC4Q13310 644 aaKnown RBP eCLIP3.29□□□□□ -1.88
CHD1-201ENST00000284049 MPP2Q14168 576 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 SPRED3Q2MJR0 410 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 RNF219Q5W0B1 726 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 CXorf57Q6NSI4 855 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 FAM117BQ6P1L5 589 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 SH3RF1Q7Z6J0 888 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 PHACTR4Q8IZ21 702 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 CRACR2BQ8N4Y2 399 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 LRRN4CLQ8ND94 238 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 C1orf131Q8NDD1 294 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 PI4K2BQ8TCG2 481 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 GATAD2BQ8WXI9 593 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 TIFAQ96CG3 184 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 NSUN5Q96P11 429 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 TARS2Q9BW92 718 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 MAP3K4Q9Y6R4 1608 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 KDM5CP41229 1560 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 E2F8A0AVK6 867 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 FAM205CA6NFA0 338 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 L1CAMP32004 1257 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 PHKA2P46019 1235 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 MLLT1Q03111 559 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 NSMFQ6X4W1 530 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 GALNT12Q8IXK2 581 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 MIER2Q8N344 545 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 CFHR5Q9BXR6 569 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 IL21Q9HBE4 155 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 IRAK4Q9NWZ3 460 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 TRHDEQ9UKU6 1024 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 VPS9D1Q9Y2B5 631 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 USP3Q9Y6I4 520 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 FRMPD2Q68DX3 1309 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 S1PR4O95977 384 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 MT-CO1P00395 513 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 CCT5P48643 541 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 MCL1Q07820 350 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 MINDY4Q4G0A6 757 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 FAM102BQ5T8I3 360 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 CATIPQ7Z7H3 387 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 SPATA5Q8NB90 893 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 FBXO27Q8NI29 283 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 THAP11Q96EK4 314 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 ZC3H12CQ9C0D7 883 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 ZNF395Q9H8N7 513 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 POLMQ9NP87 494 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 PCDHB10Q9UN67 800 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 CCDC18Q5T9S5 1454 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 MAGI2Q86UL8 1455 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 KDM5DQ9BY66 1539 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 ARHGEF5Q12774 1597 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 PLA2G4EQ3MJ16 856 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 C1orf53Q5VUE5 145 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 SV2BQ7L1I2 683 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 TRMT44Q8IYL2 757 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 FAM204AQ9H8W3 233 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 SMC4Q9NTJ3 1288 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 AFG3L2Q9Y4W6 797 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 LRRIQ1Q96JM4 1722 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 TRAV20A0A0B4J274 112 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 GABBR2O75899 941 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 WDR4P57081 412 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 HSP90AA2PQ14568 343 aaPredicted RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 LONRF2Q1L5Z9 754 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 COBLL1Q53SF7 1204 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 HEATR6Q6AI08 1181 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 FAM186BQ8IYM0 893 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 ADCY4Q8NFM4 1077 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 JADE2Q9NQC1 790 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 INVSQ9Y283 1065 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 GIT1Q9Y2X7 761 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 TLL2Q9Y6L7 1015 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 CEP162Q5TB80 1403 aa3.29□□□□□ -1.88
CHD1-201ENST00000284049 PPRC1Q5VV67 1664 aaKnown RBP3.29□□□□□ -1.88
CHD1-201ENST00000284049 DKK1O94907 266 aa3.28□□□□□ -1.88
CHD1-201ENST00000284049 ADH1AP07327 375 aa3.28□□□□□ -1.88
CHD1-201ENST00000284049 SETSIPP0DME0 302 aa3.28□□□□□ -1.88
CHD1-201ENST00000284049 HOXB1P14653 301 aaPredicted RBP3.28□□□□□ -1.88
CHD1-201ENST00000284049 XBP1P17861 261 aa3.28□□□□□ -1.88
CHD1-201ENST00000284049 BDNFP23560 247 aa3.28□□□□□ -1.88
CHD1-201ENST00000284049 KRT9P35527 623 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms