RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CCDC25Q86WR0 208 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 MIPOL1Q8TD10 442 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ACSBG1Q96GR2 724 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 FAM193BQ96PV7 902 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 MAGEF1Q9HAY2 307 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 IFT122Q9HBG6 1241 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 CCPG1Q9ULG6 757 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ARHGEF12Q9NZN5 1544 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 A0A1B0GVL5 298 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 SRGAP2BP0DMP2 458 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 HSPA8P11142 646 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 CEBPAP49715 358 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ARHGAP4P98171 946 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 SEC62Q99442 399 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 DDX21Q9NR30 783 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 C1orf112Q9NSG2 853 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 TFIP11Q9UBB9 837 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 CNPY2Q9Y2B0 182 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 UTP11Q9Y3A2 253 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ABCC1P33527 1531 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 EIF3DO15371 548 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ZEB2O60315 1214 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 GAS7O60861 476 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 GPR162Q16538 588 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 LETM2Q2VYF4 491 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 DEPTORQ8TB45 409 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 TMX3Q96JJ7 454 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 RIC8AQ9NPQ8 531 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PCDHB13Q9Y5F0 798 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 MARCKSP29966 332 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 FAM160B1Q5W0V3 765 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 EFCAB13Q8IY85 973 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ATP6V0A1Q93050 837 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 NOC4LQ9BVI4 516 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PARP2Q9UGN5 583 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 WDR17Q8IZU2 1322 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ASXL2Q76L83 1435 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PTGS1P23219 599 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PHBP35232 272 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 RASSF2P50749 326 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 BPIFB4P59827 614 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PPP2R5DQ14738 602 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 GALNT17Q6IS24 598 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 IFT20Q8IY31 132 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 AOPEPQ8N6M6 819 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ZNF408Q9H9D4 720 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 VWA3AA6NCI4 1184 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 EIF3CLB5ME19 914 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 hCG_1984214I3L0E3 225 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PPFIA4O75335 1185 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PRPF6O94906 941 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 KRT3P12035 628 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 TERF1P54274 439 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 USP14P54578 494 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 TBC1D8BQ0IIM8 1120 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PPFIA1Q13136 1202 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 NMIQ13287 307 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 SLC4A8Q2Y0W8 1093 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ANO6Q4KMQ2 910 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PPP1R21Q6ZMI0 780 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 GBP6Q6ZN66 633 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 MAP7D3Q8IWC1 876 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ZNF713Q8N859 430 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PRPF38AQ8NAV1 312 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 HVCN1Q96D96 273 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 TBC1D32Q96NH3 1257 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 EIF3CQ99613 913 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ASIC3Q9UHC3 531 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ATRXP46100 2492 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 CYP26C1Q6V0L0 522 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 NBPF11Q86T75 865 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ABI1Q8IZP0 508 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 NLGN1Q8N2Q7 840 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 MIGA1Q8NAN2 632 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PPP4R1Q8TF05 950 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 SDCCAG3Q96C92 435 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 TBC1D2Q9BYX2 928 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PKD2L1Q9P0L9 805 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ADD3Q9UEY8 706 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 SLC8A2Q9UPR5 921 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 AKR1B15C9JRZ8 316 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 STAM2O75886 525 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 FOSP01100 380 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 KPNA2P52292 529 aaKnown RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 GRK7Q8WTQ7 553 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 CSRNP1Q96S65 589 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 KCNK9Q9NPC2 374 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 PLCB1Q9NQ66 1216 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ATP8A2Q9NTI2 1148 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 SHANK2Q9UPX8 1470 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 A0A1B0GUA9 196 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 TMEM110-MUSTN1A8MSY1 372 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 MAP3K7O43318 606 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 S100BP04271 92 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-201ENST00000283254 LMNB1P20700 586 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 ATP11AP98196 1134 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 LMNTD2Q8IXW0 634 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 SMC5Q8IY18 1101 aa4.5□□□□□ -1.69
SCN3A-201ENST00000283254 MICAL1Q8TDZ2 1067 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms