RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 LRRC8AQ8IWT6 810 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 CACTINQ8WUQ7 758 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 ARHGEF1Q92888 912 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 CRNKL1Q9BZJ0 848 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 FBXO2Q9UK22 296 aaPredicted RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 NAV1Q8NEY1 1877 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 SMIM22K7EJ46 135 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 PTPREP23469 700 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 LRMPQ12912 555 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 IFIT1BQ5T764 474 aaKnown RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 SMIM5Q71RC9 77 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 CATIPQ7Z7H3 387 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 AMIGO3Q86WK7 504 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 IQCA1Q86XH1 822 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 SHISA4Q96DD7 197 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 PHF20Q9BVI0 1012 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 OSBPL5Q9H0X9 879 aaPredicted RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 DCP1AQ9NPI6 582 aaPredicted RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 KCND1Q9NSA2 647 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 IMPACTQ9P2X3 320 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 ARPP21Q9UBL0 812 aaPredicted RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 KCNH3Q9ULD8 1083 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 KCNJ14Q9UNX9 436 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 SMTNL1A8MU46 457 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 MYO1BO43795 1136 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 MDM2Q00987 491 aaPredicted RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 DNTTIP2Q5QJE6 756 aaKnown RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 KRBA2Q6ZNG9 492 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 C15orf52Q6ZUT6 534 aaKnown RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 METTL16Q86W50 562 aaKnown RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 CLIC6Q96NY7 704 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 CEP131Q9UPN4 1083 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 SRPRBQ9Y5M8 271 aaKnown RBP8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 ROBO3Q96MS0 1386 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 CDK5RAP2Q96SN8 1893 aa8.34□□□□□ -1.07
SPARCL1-201ENST00000282470 CYP2D7A0A087X1C5 515 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 USP17L12C9JPN9 530 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 USP17L21D6R901 530 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 XBP1P17861 261 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 GSDMDP57764 484 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 NT5DC1Q5TFE4 455 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 SPTY2D1Q68D10 685 aaPredicted RBP8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 NUP133Q8WUM0 1156 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 USP21Q9UK80 565 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 LRRC37AA6NMS7 1700 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 PRDX5P30044 214 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 TPM4P67936 248 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 NR5A1Q13285 461 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 DHX8Q14562 1220 aaKnown RBP8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 LONRF3Q496Y0 759 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 TMTC3Q6ZXV5 915 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 CMTR1Q8N1G2 835 aaKnown RBP8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 HSD3B7Q9H2F3 369 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 TFCP2L1Q9NZI6 479 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 MKRN1Q9UHC7 482 aaKnown RBP8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 ADRA2BP18089 450 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 GRAPQ13588 217 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 GRAPLQ8TC17 118 aaPredicted RBP8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 OXER1Q8TDS5 423 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 TNFRSF25Q93038 417 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 AATFQ9NY61 560 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 PCDHB6Q9Y5E3 794 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 LTBP1Q14766 1721 aa8.33□□□□□ -1.08
SPARCL1-201ENST00000282470 BIN1O00499 593 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 CCZ1BP86790 482 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 CCZ1P86791 482 aaPredicted RBP8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 PNOCQ13519 176 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 TXNRD3Q86VQ6 643 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 CNNM3Q8NE01 707 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 FAM13BQ9NYF5 915 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 HOOK1Q9UJC3 728 aaKnown RBP8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 XDHP47989 1333 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 UBAP1LF5GYI3 381 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 PLEKHA8P1O95397 391 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 KRT2P35908 639 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 AKAP17AQ02040 695 aaKnown RBP8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 MYL5Q02045 173 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 NPY5RQ15761 445 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 WDR66Q8TBY9 1149 aa8.32□□□□□ -1.08
SPARCL1-201ENST00000282470 FOCADQ5VW36 1801 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 PRDM1O75626 825 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 BMP15O95972 392 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 RFC4P35249 363 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 KCNJ6P48051 423 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 SARSP49591 514 aaKnown RBP8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 PDE4BQ07343 736 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 CRY2Q49AN0 593 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 TRAPPC3LQ5T215 181 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 FOXP4Q8IVH2 680 aaPredicted RBP8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 CCDC82Q8N4S0 544 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 SPATA20Q8TB22 786 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 ANKS1AQ92625 1134 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 XPO4Q9C0E2 1151 aaKnown RBP8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 TRIM75PA6NK02 468 aa8.31□□□□□ -1.08
SPARCL1-201ENST00000282470 PPP4CP60510 307 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms