RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ISCA1Q9BUE6 129 aa12.99□□□□□ -0.33
SCLT1-201ENST00000281142 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-201ENST00000281142 MYO1CO00159 1063 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 CBFA2T2O43439 604 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 N4BP1O75113 896 aaKnown RBP12.98□□□□□ -0.33
SCLT1-201ENST00000281142 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
SCLT1-201ENST00000281142 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 PHKBQ93100 1093 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 MPHOSPH8Q99549 860 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 SENP2Q9HC62 589 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 HPSEQ9Y251 543 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 GYS1P13807 737 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 TBC1D9BQ66K14 1250 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 FOXR1Q6PIV2 292 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 CLEC4GQ6UXB4 293 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 BRAPQ7Z569 592 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 VPS37DQ86XT2 251 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
SCLT1-201ENST00000281142 YY1AP1Q9H869 796 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 LZTFL1Q9NQ48 299 aa12.98□□□□□ -0.33
SCLT1-201ENST00000281142 FGAP02671 866 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 CASP7P55210 303 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 GRIN1Q05586 938 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 TBX2Q13207 712 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-201ENST00000281142 MCM6Q14566 821 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 PTPAQ15257 358 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-201ENST00000281142 GRAMD1CQ8IYS0 662 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 PUS3Q9BZE2 481 aaKnown RBP12.97□□□□□ -0.33
SCLT1-201ENST00000281142 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 PDE11AQ9HCR9 933 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 SOWAHDA6NJG2 315 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 PI16Q6UXB8 463 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 ZNF652Q9Y2D9 606 aa12.97□□□□□ -0.33
SCLT1-201ENST00000281142 ATP8B1O43520 1251 aa12.96□□□□□ -0.33
SCLT1-201ENST00000281142 TPM1P09493 284 aa12.96□□□□□ -0.33
SCLT1-201ENST00000281142 FOXO4P98177 505 aa12.96□□□□□ -0.33
SCLT1-201ENST00000281142 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
SCLT1-201ENST00000281142 FLAD1Q8NFF5 587 aa12.96□□□□□ -0.33
SCLT1-201ENST00000281142 MED15Q96RN5 788 aa12.96□□□□□ -0.33
SCLT1-201ENST00000281142 PNKPQ96T60 521 aa12.96□□□□□ -0.33
SCLT1-201ENST00000281142 ALG1Q9BT22 464 aa12.96□□□□□ -0.33
SCLT1-201ENST00000281142 GEMIN8Q9NWZ8 242 aaKnown RBP12.96□□□□□ -0.33
SCLT1-201ENST00000281142 NIP7Q9Y221 180 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCLT1-201ENST00000281142 A0A1B0GUL7 405 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 ADORA1P30542 326 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 TRIM28Q13263 835 aaKnown RBP12.96□□□□□ -0.34
SCLT1-201ENST00000281142 SCARF1Q14162 830 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 KRT40Q6A162 431 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 FCHSD1Q86WN1 690 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 CNNM3Q8NE01 707 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 RABGGTAQ92696 567 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 GOLGA1Q92805 767 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 SAMSN1Q9NSI8 373 aaKnown RBP12.96□□□□□ -0.34
SCLT1-201ENST00000281142 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.34
SCLT1-201ENST00000281142 VPS18Q9P253 973 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 NFE2L3Q9Y4A8 694 aa12.96□□□□□ -0.34
SCLT1-201ENST00000281142 MAP3K14Q99558 947 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 PUS7LQ9H0K6 701 aaKnown RBP12.95□□□□□ -0.34
SCLT1-201ENST00000281142 ANKZF1Q9H8Y5 726 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 SEC31BQ9NQW1 1179 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 RGL2O15211 777 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 ABL1P00519 1130 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 TXLNAP40222 546 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 GPS2Q13227 327 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 RESP18Q5W5W9 173 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 CPLX3Q8WVH0 158 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
SCLT1-201ENST00000281142 ANKRD65E5RJM6 399 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 DHX8Q14562 1220 aaKnown RBP12.94□□□□□ -0.34
SCLT1-201ENST00000281142 SYNE4Q8N205 404 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 MAN1B1Q9UKM7 699 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 KCNH3Q9ULD8 1083 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 TEX33O43247 280 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 IMMTQ16891 758 aaKnown RBP12.94□□□□□ -0.34
SCLT1-201ENST00000281142 SPECC1LQ69YQ0 1117 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 RAD9BQ6WBX8 426 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-201ENST00000281142 MAP2K7O14733 419 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 STX10O60499 249 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-201ENST00000281142 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 NFIXQ14938 502 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 FAM89AQ96GI7 184 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 INCENPQ9NQS7 918 aa12.94□□□□□ -0.34
SCLT1-201ENST00000281142 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
SCLT1-201ENST00000281142 PHACTR2O75167 634 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 CYB5R4Q7L1T6 521 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 LOC102724159A0A0B4J2E5 919 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 H7C1W4 665 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms