RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 STAMQ92783 540 aa12.65□□□□□ -0.38
USP6NL-201ENST00000277575 UIMC1Q96RL1 719 aa12.65□□□□□ -0.38
USP6NL-201ENST00000277575 SRRTQ9BXP5 876 aaKnown RBP12.65□□□□□ -0.38
USP6NL-201ENST00000277575 ARFGAP3Q9NP61 516 aa12.65□□□□□ -0.38
USP6NL-201ENST00000277575 HOMER2Q9NSB8 354 aa12.65□□□□□ -0.38
USP6NL-201ENST00000277575 LMBRD1Q9NUN5 540 aa12.65□□□□□ -0.38
USP6NL-201ENST00000277575 SPATA31A3Q5VYP0 1347 aa12.65□□□□□ -0.38
USP6NL-201ENST00000277575 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.39
USP6NL-201ENST00000277575 PFKFB2O60825 505 aa12.65□□□□□ -0.39
USP6NL-201ENST00000277575 EPB41P11171 864 aaKnown RBP12.65□□□□□ -0.39
USP6NL-201ENST00000277575 HARSP12081 509 aaKnown RBP12.65□□□□□ -0.39
USP6NL-201ENST00000277575 RASEFQ8IZ41 740 aa12.65□□□□□ -0.39
USP6NL-201ENST00000277575 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.39
USP6NL-201ENST00000277575 SLU7O95391 586 aaKnown RBP12.64□□□□□ -0.39
USP6NL-201ENST00000277575 BIRC3Q13489 604 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
USP6NL-201ENST00000277575 CHURC1Q8WUH1 139 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 NFE2L3Q9Y4A8 694 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 CYP27B1O15528 508 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
USP6NL-201ENST00000277575 BTDP43251 543 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 ZNF569Q5MCW4 686 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 FNBP1Q96RU3 617 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 DNM3Q9UQ16 869 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 LEMD3Q9Y2U8 911 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 XDHP47989 1333 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
USP6NL-201ENST00000277575 DKC1O60832 514 aaKnown RBP eCLIP12.64□□□□□ -0.39
USP6NL-201ENST00000277575 SERPINB2P05120 415 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 GJC1P36383 396 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 CEP83Q9Y592 693 aa12.64□□□□□ -0.39
USP6NL-201ENST00000277575 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 PAK1Q13153 545 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-201ENST00000277575 KLRF2D3W0D1 207 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 FANCCQ00597 558 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 PTPN12Q05209 780 aaKnown RBP12.63□□□□□ -0.39
USP6NL-201ENST00000277575 POSTNQ15063 836 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 NOSTRINQ8IVI9 506 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 USP28Q96RU2 1077 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 LSG1Q9H089 658 aaKnown RBP12.63□□□□□ -0.39
USP6NL-201ENST00000277575 CBX8Q9HC52 389 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 ATG3Q9NT62 314 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 ATP8A2Q9NTI2 1148 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP6NL-201ENST00000277575 A2ML1A8K2U0 1454 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 MAP3K4Q9Y6R4 1608 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 DDX39AO00148 427 aaKnown RBP12.63□□□□□ -0.39
USP6NL-201ENST00000277575 CABP7Q86V35 215 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 CEP112Q8N8E3 955 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP6NL-201ENST00000277575 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 FMNL3Q8IVF7 1028 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 IFT74Q96LB3 600 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP6NL-201ENST00000277575 MTMR6Q9Y217 621 aa12.63□□□□□ -0.39
USP6NL-201ENST00000277575 V9GYY5 206 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-201ENST00000277575 SYNRGQ9UMZ2 1314 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
USP6NL-201ENST00000277575 SEMA3EO15041 775 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 CYP21A2P08686 494 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 ZNF445P59923 1031 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 ADCK5Q3MIX3 580 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 CCDC122Q5T0U0 273 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 ADALQ6DHV7 355 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 SYT10Q6XYQ8 523 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 BBXQ8WY36 941 aaPredicted RBP12.62□□□□□ -0.39
USP6NL-201ENST00000277575 ANTXR1Q9H6X2 564 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 TMEM110-MUSTN1A8MSY1 372 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 MCM6Q14566 821 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 MAEAQ7L5Y9 396 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
USP6NL-201ENST00000277575 TET3O43151 1660 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 LMAN1P49257 510 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 NLRP12P59046 1061 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 CERKLQ49MI3 558 aaPredicted RBP12.62□□□□□ -0.39
USP6NL-201ENST00000277575 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 BLIDQ8IZY5 108 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 IKBKGQ9Y6K9 419 aa12.62□□□□□ -0.39
USP6NL-201ENST00000277575 BBOX1O75936 387 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 KRT27Q7Z3Y8 459 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 SIRT2Q8IXJ6 389 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 LRRC47Q8N1G4 583 aaKnown RBP12.61□□□□□ -0.39
USP6NL-201ENST00000277575 GINS2Q9Y248 185 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 PDIA3P30101 505 aaKnown RBP12.61□□□□□ -0.39
USP6NL-201ENST00000277575 IRX3P78415 501 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-201ENST00000277575 BRDTQ58F21 947 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-201ENST00000277575 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 GOLGA8HP0CJ92 632 aa12.61□□□□□ -0.39
USP6NL-201ENST00000277575 PCP11498 1178 aaKnown RBP12.61□□□□□ -0.39
USP6NL-201ENST00000277575 PI16Q6UXB8 463 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms