RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
SHPRH-201ENST00000275233 PRPF6O94906 941 aaKnown RBP13.24□□□□□ -0.29
SHPRH-201ENST00000275233 PAK1Q13153 545 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 LIN9Q5TKA1 542 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 GADL1Q6ZQY3 521 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 TTC14Q96N46 770 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 IGSF3O75054 1194 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 CD19P15391 556 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 TCIRG1Q13488 830 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 RABEP2Q9H5N1 569 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 ZWINTO95229 277 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 VIMP08670 466 aaKnown RBP13.24□□□□□ -0.29
SHPRH-201ENST00000275233 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHPRH-201ENST00000275233 M0QZ92 97 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 JAK2O60674 1132 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 ABL1P00519 1130 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 CABP7Q86V35 215 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 JAKMIP2Q96AA8 810 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 EXOC3O60645 756 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 CSPG5O95196 566 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 ARID4AP29374 1257 aaPredicted RBP13.23□□□□□ -0.29
SHPRH-201ENST00000275233 PPP2R3AQ06190 1150 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 NONOQ15233 471 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHPRH-201ENST00000275233 CETN3O15182 167 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 HSPA1LP34931 641 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 IFRD2Q12894 506 aaPredicted RBP13.23□□□□□ -0.29
SHPRH-201ENST00000275233 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
SHPRH-201ENST00000275233 FAM102BQ5T8I3 360 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 GLG1Q92896 1179 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 H7C1D1 291 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 GYG1P46976 350 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 CASC4Q6P4E1 433 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 CEP57Q86XR8 500 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
SHPRH-201ENST00000275233 SDR42E1Q8WUS8 393 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 ZKSCAN5Q9Y2L8 839 aa13.23□□□□□ -0.29
SHPRH-201ENST00000275233 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHPRH-201ENST00000275233 DNM2P50570 870 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 GCKRQ14397 625 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 ARHGEF16Q5VV41 709 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 DCUN1D2Q6PH85 259 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 MFSD14BQ5SR56 506 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 MROH5Q6ZUA9 1318 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 SBNO1A3KN83 1393 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 TNNI1P19237 187 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 LRRC47Q8N1G4 583 aaKnown RBP13.22□□□□□ -0.29
SHPRH-201ENST00000275233 SUPT20HQ8NEM7 779 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 NELFBQ8WX92 580 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
SHPRH-201ENST00000275233 CTTNBP2NLQ9P2B4 639 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 KCNQ3O43525 872 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 CDC37L1Q7L3B6 337 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 ITIH3Q06033 890 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 BIRC2Q13490 618 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 KLHL7Q8IXQ5 586 aa13.22□□□□□ -0.29
SHPRH-201ENST00000275233 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 BSPRYQ5W0U4 402 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 CYP26C1Q6V0L0 522 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 KIAA0825Q8IV33 1275 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 INTS4Q96HW7 963 aaKnown RBP13.21□□□□□ -0.29
SHPRH-201ENST00000275233 UTP11Q9Y3A2 253 aaKnown RBP13.21□□□□□ -0.29
SHPRH-201ENST00000275233 ZNF202O95125 648 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 CTSWP56202 376 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 SMC5Q8IY18 1101 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 MED10Q9BTT4 135 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 ALAS1P13196 640 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 FANCCQ00597 558 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 PTPROQ16827 1216 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 ZNF365Q70YC5 407 aa13.21□□□□□ -0.29
SHPRH-201ENST00000275233 GOLGA8HP0CJ92 632 aa13.21□□□□□ -0.3
SHPRH-201ENST00000275233 KBTBD3Q8NAB2 608 aa13.21□□□□□ -0.3
SHPRH-201ENST00000275233 TRPC6Q9Y210 931 aa13.21□□□□□ -0.3
SHPRH-201ENST00000275233 CYP2J2P51589 502 aa13.21□□□□□ -0.3
SHPRH-201ENST00000275233 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.3
SHPRH-201ENST00000275233 TESK2Q96S53 571 aa13.21□□□□□ -0.3
SHPRH-201ENST00000275233 CSADQ9Y600 493 aa13.21□□□□□ -0.3
SHPRH-201ENST00000275233 SMCO2A6NFE2 343 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 EVCP57679 992 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 PPARAQ07869 468 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 PNOCQ13519 176 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 BCAMP50895 628 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 KMT5BQ4FZB7 885 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 VWA3BQ502W6 1294 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 KRT40Q6A162 431 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 MLXIPQ9HAP2 919 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 NUP160Q12769 1436 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
SHPRH-201ENST00000275233 E7EWF7 191 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 CUTAO60888 179 aa13.2□□□□□ -0.3
SHPRH-201ENST00000275233 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms