RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 JAKMIP1Q96N16 626 aaKnown RBP20.34■□□□□ 0.85
SKP2-201ENST00000274254 ZSWIM5Q9P217 1185 aa20.34■□□□□ 0.85
SKP2-201ENST00000274254 PPP1R12BO60237 982 aaPredicted RBP20.33■□□□□ 0.85
SKP2-201ENST00000274254 RANBP6O60518 1105 aaKnown RBP20.33■□□□□ 0.85
SKP2-201ENST00000274254 KDM4AO75164 1064 aa20.33■□□□□ 0.85
SKP2-201ENST00000274254 PSMA5P28066 241 aa20.33■□□□□ 0.85
SKP2-201ENST00000274254 ZSWIM6Q9HCJ5 1215 aa20.33■□□□□ 0.85
SKP2-201ENST00000274254 FZD1Q9UP38 647 aa20.33■□□□□ 0.85
SKP2-201ENST00000274254 PASKQ96RG2 1323 aa20.33■□□□□ 0.85
SKP2-201ENST00000274254 PAPPA2Q9BXP8 1791 aa20.33■□□□□ 0.84
SKP2-201ENST00000274254 PLIN4Q96Q06 1357 aa20.33■□□□□ 0.84
SKP2-201ENST00000274254 HMGB1P09429 215 aaKnown RBP20.32■□□□□ 0.84
SKP2-201ENST00000274254 AKR1B1P15121 316 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 CAP2P40123 477 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 MAP3K11Q16584 847 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 FAM47AQ5JRC9 791 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.32■□□□□ 0.84
SKP2-201ENST00000274254 TRPM7Q96QT4 1865 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 GREB1LQ9C091 1923 aaPredicted RBP20.32■□□□□ 0.84
SKP2-201ENST00000274254 CTNND1O60716 968 aaKnown RBP20.32■□□□□ 0.84
SKP2-201ENST00000274254 CASTP20810 708 aaKnown RBP20.32■□□□□ 0.84
SKP2-201ENST00000274254 TFAP4Q01664 338 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 CYB5R4Q7L1T6 521 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 NEDD1Q8NHV4 660 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 WRNIP1Q96S55 665 aa20.32■□□□□ 0.84
SKP2-201ENST00000274254 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.32■□□□□ 0.84
SKP2-201ENST00000274254 TSPY2A6NKD2 308 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 CELF2O95319 508 aaKnown RBP20.31■□□□□ 0.84
SKP2-201ENST00000274254 GDF11O95390 407 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 TSPY3P0CV98 308 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 TSPY8P0CW00 308 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 INPP5BP32019 993 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 MCM5P33992 734 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 ANTXR2P58335 489 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 JAG1P78504 1218 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 FSTL1Q12841 308 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 PRKG1Q13976 671 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 SHROOM1Q2M3G4 852 aaPredicted RBP20.31■□□□□ 0.84
SKP2-201ENST00000274254 BLOC1S2Q6QNY1 142 aa20.31■□□□□ 0.84
SKP2-201ENST00000274254 DHX32Q7L7V1 743 aaKnown RBP20.31■□□□□ 0.84
SKP2-201ENST00000274254 FKBP1BP68106 108 aa20.3■□□□□ 0.84
SKP2-201ENST00000274254 EXOSC10Q01780 885 aaKnown RBP20.3■□□□□ 0.84
SKP2-201ENST00000274254 ABCB5Q2M3G0 1257 aa20.3■□□□□ 0.84
SKP2-201ENST00000274254 CST9Q5W186 159 aa20.3■□□□□ 0.84
SKP2-201ENST00000274254 RUFY3Q7L099 469 aa20.3■□□□□ 0.84
SKP2-201ENST00000274254 UPF3BQ9BZI7 483 aaKnown RBP20.3■□□□□ 0.84
SKP2-201ENST00000274254 ZNF408Q9H9D4 720 aa20.3■□□□□ 0.84
SKP2-201ENST00000274254 GINM1Q9NU53 330 aa20.3■□□□□ 0.84
SKP2-201ENST00000274254 ANGEL1Q9UNK9 670 aaKnown RBP20.3■□□□□ 0.84
SKP2-201ENST00000274254 WDR19Q8NEZ3 1342 aa20.3■□□□□ 0.84
SKP2-201ENST00000274254 IGKV6D-41A0A0C4DH26 115 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 GH2P01242 217 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 CPA1P15085 419 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 RPS6KB1P23443 525 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 GUCY1A2P33402 732 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 IREB2P48200 963 aaKnown RBP20.29■□□□□ 0.84
SKP2-201ENST00000274254 NOL9Q5SY16 702 aaKnown RBP20.29■□□□□ 0.84
SKP2-201ENST00000274254 TMEM179Q6ZVK1 233 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 ARMC9Q7Z3E5 817 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 IL17RBQ9NRM6 502 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 TCP11L1Q9NUJ3 509 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 OTOFQ9HC10 1997 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 ATAD5Q96QE3 1844 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 DOCK1Q14185 1865 aa20.29■□□□□ 0.84
SKP2-201ENST00000274254 ASNSP08243 561 aa20.28■□□□□ 0.84
SKP2-201ENST00000274254 MAP3K9P80192 1104 aa20.28■□□□□ 0.84
SKP2-201ENST00000274254 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.28■□□□□ 0.84
SKP2-201ENST00000274254 MOB2Q70IA6 237 aa20.28■□□□□ 0.84
SKP2-201ENST00000274254 CHST3Q7LGC8 479 aa20.28■□□□□ 0.84
SKP2-201ENST00000274254 IQCA1Q86XH1 822 aa20.28■□□□□ 0.84
SKP2-201ENST00000274254 SCYL3Q8IZE3 742 aa20.28■□□□□ 0.84
SKP2-201ENST00000274254 MTA3Q9BTC8 594 aa20.28■□□□□ 0.84
SKP2-201ENST00000274254 GBA2Q9HCG7 927 aaPredicted RBP20.28■□□□□ 0.84
SKP2-201ENST00000274254 CYP46A1Q9Y6A2 500 aa20.28■□□□□ 0.84
SKP2-201ENST00000274254 MPHOSPH10O00566 681 aaKnown RBP20.27■□□□□ 0.84
SKP2-201ENST00000274254 PRC1O43663 620 aa20.27■□□□□ 0.84
SKP2-201ENST00000274254 NOVP48745 357 aa20.27■□□□□ 0.84
SKP2-201ENST00000274254 TTLL12Q14166 644 aaPredicted RBP20.27■□□□□ 0.84
SKP2-201ENST00000274254 LDLRAD1Q5T700 205 aa20.27■□□□□ 0.84
SKP2-201ENST00000274254 ZKSCAN4Q969J2 545 aaPredicted RBP20.27■□□□□ 0.84
SKP2-201ENST00000274254 CABP5Q9NP86 173 aa20.27■□□□□ 0.84
SKP2-201ENST00000274254 UNCXA6NJT0 531 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 NMT2O60551 498 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 VGLL4Q14135 290 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 RABEP1Q15276 862 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 ANKRD13AQ8IZ07 590 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 CEP95Q96GE4 821 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 TMEM87BQ96K49 555 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 TCEANC2Q96MN5 208 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 ZSCAN10Q96SZ4 725 aaPredicted RBP20.27■□□□□ 0.83
SKP2-201ENST00000274254 ZKSCAN3Q9BRR0 538 aa20.27■□□□□ 0.83
SKP2-201ENST00000274254 SEPT2Q15019 361 aa20.26■□□□□ 0.83
SKP2-201ENST00000274254 SEC23AQ15436 765 aa20.26■□□□□ 0.83
SKP2-201ENST00000274254 FBXL16Q8N461 479 aa20.26■□□□□ 0.83
SKP2-201ENST00000274254 C2orf69Q8N8R5 385 aa20.26■□□□□ 0.83
SKP2-201ENST00000274254 IGDCC4Q8TDY8 1250 aa20.26■□□□□ 0.83
SKP2-201ENST00000274254 TTC14Q96N46 770 aa20.26■□□□□ 0.83
SKP2-201ENST00000274254 UBAC1Q9BSL1 405 aa20.26■□□□□ 0.83
SKP2-201ENST00000274254 KANSL2Q9H9L4 492 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms