RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 IGSF1Q8N6C5 1336 aa14.85□□□□□ -0.03
SMG9-201ENST00000270066 STX10O60499 249 aa14.85□□□□□ -0.03
SMG9-201ENST00000270066 PLCB3Q01970 1234 aa14.85□□□□□ -0.03
SMG9-201ENST00000270066 NSMFQ6X4W1 530 aa14.85□□□□□ -0.03
SMG9-201ENST00000270066 FAM196AQ6ZSG2 479 aa14.85□□□□□ -0.03
SMG9-201ENST00000270066 OGFRQ9NZT2 677 aa14.85□□□□□ -0.03
SMG9-201ENST00000270066 BCS1LQ9Y276 419 aa14.85□□□□□ -0.03
SMG9-201ENST00000270066 TSPOAP1O95153 1857 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 HARSP12081 509 aaKnown RBP14.84□□□□□ -0.03
SMG9-201ENST00000270066 KRT5P13647 590 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 MYL10Q9BUA6 226 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 WDR17Q8IZU2 1322 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 USPL1Q5W0Q7 1092 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 TMC4Q7Z404 712 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 CCDC117Q8IWD4 279 aaPredicted RBP14.84□□□□□ -0.03
SMG9-201ENST00000270066 REXO1Q8N1G1 1221 aaKnown RBP14.84□□□□□ -0.03
SMG9-201ENST00000270066 PNMA2Q9UL42 364 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 GUCA1BQ9UMX6 200 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 CAPN2P17655 700 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 TRPC3Q13507 836 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 HAUS7Q99871 368 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 CLSTN2Q9H4D0 955 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 CHD1O14646 1710 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 CFBP00751 764 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 DNM2P50570 870 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 CHRNDQ07001 517 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 PRKG1Q13976 671 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 NLRX1Q86UT6 975 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 GOLGA1Q92805 767 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 ATP8A2Q9NTI2 1148 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 MTUS1Q9ULD2 1270 aa14.84□□□□□ -0.03
SMG9-201ENST00000270066 U2AF2P26368 475 aaKnown RBP eCLIP14.83□□□□□ -0.03
SMG9-201ENST00000270066 TBC1D8BQ0IIM8 1120 aa14.83□□□□□ -0.03
SMG9-201ENST00000270066 FAM47AQ5JRC9 791 aa14.83□□□□□ -0.03
SMG9-201ENST00000270066 C17orf53Q8N3J3 647 aaPredicted RBP14.83□□□□□ -0.03
SMG9-201ENST00000270066 MLKLQ8NB16 471 aa14.83□□□□□ -0.03
SMG9-201ENST00000270066 SLC5A4Q9NY91 659 aa14.83□□□□□ -0.03
SMG9-201ENST00000270066 CIAO1O76071 339 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 SNX16P57768 344 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 PHKBQ93100 1093 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 ZSCAN10Q96SZ4 725 aaPredicted RBP14.83□□□□□ -0.04
SMG9-201ENST00000270066 POLR2DO15514 142 aaKnown RBP14.83□□□□□ -0.04
SMG9-201ENST00000270066 GYG1P46976 350 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 PAK1Q13153 545 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 DPY19L2Q6NUT2 758 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 IFNL3Q8IZI9 196 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMG9-201ENST00000270066 SYNRGQ9UMZ2 1314 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 VGLL3A8MV65 326 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 SEMA3EO15041 775 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 SEL1L2Q5TEA6 688 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 MICALL1Q8N3F8 863 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 OTUD6BQ8N6M0 293 aa14.83□□□□□ -0.04
SMG9-201ENST00000270066 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMG9-201ENST00000270066 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 USP17L21D6R901 530 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 OPA1O60313 960 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 PDE6AP16499 860 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
SMG9-201ENST00000270066 ROBO2Q9HCK4 1378 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 IVLP07476 585 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 TNFAIP3P21580 790 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 GRIPAP1Q4V328 841 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 CSGALNACT2Q8N6G5 542 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 ATP10DQ9P241 1426 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 XDHP47989 1333 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 CABP7Q86V35 215 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 KIFC2Q96AC6 838 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 ZNF274Q96GC6 653 aaPredicted RBP14.82□□□□□ -0.04
SMG9-201ENST00000270066 MAK16Q9BXY0 300 aaKnown RBP14.82□□□□□ -0.04
SMG9-201ENST00000270066 NSRP1Q9H0G5 558 aaKnown RBP14.82□□□□□ -0.04
SMG9-201ENST00000270066 NT5C3AQ9H0P0 336 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 DDX39AO00148 427 aaKnown RBP14.82□□□□□ -0.04
SMG9-201ENST00000270066 PCP11498 1178 aaKnown RBP14.82□□□□□ -0.04
SMG9-201ENST00000270066 TNNC1P63316 161 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 BEGAINQ9BUH8 593 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 NUP58Q9BVL2 599 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 LEMD3Q9Y2U8 911 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 KDM3AQ9Y4C1 1321 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 MRPS9P82933 396 aaKnown RBP14.82□□□□□ -0.04
SMG9-201ENST00000270066 PSMD1Q99460 953 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 GPR108Q9NPR9 543 aa14.82□□□□□ -0.04
SMG9-201ENST00000270066 SPATA31E1Q6ZUB1 1445 aa14.81□□□□□ -0.04
SMG9-201ENST00000270066 ATP2A2P16615 1042 aaKnown RBP14.81□□□□□ -0.04
SMG9-201ENST00000270066 BCAMP50895 628 aa14.81□□□□□ -0.04
SMG9-201ENST00000270066 ZNF569Q5MCW4 686 aa14.81□□□□□ -0.04
SMG9-201ENST00000270066 BAG1Q99933 345 aaPredicted RBP14.81□□□□□ -0.04
SMG9-201ENST00000270066 ZNF804BA4D1E1 1349 aa14.81□□□□□ -0.04
SMG9-201ENST00000270066 PABPC4Q13310 644 aaKnown RBP eCLIP14.81□□□□□ -0.043e-9■■■■■ 30.9
SMG9-201ENST00000270066 EAPPQ56P03 285 aaPredicted RBP14.81□□□□□ -0.04
SMG9-201ENST00000270066 LIN9Q5TKA1 542 aa14.81□□□□□ -0.04
SMG9-201ENST00000270066 SMCR8Q8TEV9 937 aaPredicted RBP14.81□□□□□ -0.04
SMG9-201ENST00000270066 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
SMG9-201ENST00000270066 TRIM6Q9C030 488 aaPredicted RBP14.81□□□□□ -0.04
SMG9-201ENST00000270066 PPEF1O14829 653 aaPredicted RBP14.81□□□□□ -0.04
SMG9-201ENST00000270066 BTDP43251 543 aa14.81□□□□□ -0.04
SMG9-201ENST00000270066 KIAA1524Q8TCG1 905 aa14.81□□□□□ -0.04
SMG9-201ENST00000270066 RNF123Q5XPI4 1314 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms