RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.244e-6■□□□□ 10.9
ERBB2-201ENST00000269571 KDM5AP29375 1690 aaKnown RBP13.54□□□□□ -0.24
ERBB2-201ENST00000269571 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
ERBB2-201ENST00000269571 TAF5LO75529 589 aa13.54□□□□□ -0.24
ERBB2-201ENST00000269571 BAG3O95817 575 aa13.54□□□□□ -0.24
ERBB2-201ENST00000269571 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
ERBB2-201ENST00000269571 PNMA8AQ86V59 439 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-201ENST00000269571 NBPF5PQ86XG9 351 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-201ENST00000269571 PGBD1Q96JS3 809 aa13.54□□□□□ -0.24
ERBB2-201ENST00000269571 TRIM6Q9C030 488 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-201ENST00000269571 GJB4Q9NTQ9 266 aa13.54□□□□□ -0.24
ERBB2-201ENST00000269571 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
ERBB2-201ENST00000269571 BMP15O95972 392 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 V9GY48 417 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-201ENST00000269571 PFKFB2O60825 505 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 KRT2P35908 639 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
ERBB2-201ENST00000269571 MBD4O95243 580 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 DZIP3Q86Y13 1208 aaKnown RBP13.53□□□□□ -0.24
ERBB2-201ENST00000269571 SLC35F6Q8N357 371 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 TMTC2Q8N394 836 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 ARFGAP2Q8N6H7 521 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 PAF1Q8N7H5 531 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 KIAA0232Q92628 1395 aa13.53□□□□□ -0.24
ERBB2-201ENST00000269571 F8W031 263 aaPredicted RBP13.52□□□□□ -0.24
ERBB2-201ENST00000269571 KRT13P13646 458 aa13.52□□□□□ -0.24
ERBB2-201ENST00000269571 CCDC25Q86WR0 208 aa13.52□□□□□ -0.24
ERBB2-201ENST00000269571 KLHL7Q8IXQ5 586 aa13.52□□□□□ -0.24
ERBB2-201ENST00000269571 NOC4LQ9BVI4 516 aaKnown RBP13.52□□□□□ -0.24
ERBB2-201ENST00000269571 CNNM2Q9H8M5 875 aa13.52□□□□□ -0.24
ERBB2-201ENST00000269571 PPANQ9NQ55 473 aaKnown RBP13.52□□□□□ -0.24
ERBB2-201ENST00000269571 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.52□□□□□ -0.24
ERBB2-201ENST00000269571 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.24
ERBB2-201ENST00000269571 ZKSCAN8Q15776 578 aaPredicted RBP13.52□□□□□ -0.24
ERBB2-201ENST00000269571 PTPROQ16827 1216 aa13.52□□□□□ -0.24
ERBB2-201ENST00000269571 KCTD16Q68DU8 428 aa13.52□□□□□ -0.24
ERBB2-201ENST00000269571 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.24
ERBB2-201ENST00000269571 SAR1BQ9Y6B6 198 aa13.52□□□□□ -0.24
ERBB2-201ENST00000269571 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
ERBB2-201ENST00000269571 LDHCP07864 332 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 RFC4P35249 363 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 GUCY2FP51841 1108 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 SAMM50Q9Y512 469 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 PCDH11XQ9BZA7 1347 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 PCDH11YQ9BZA8 1340 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 BTBD18B2RXH4 712 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
ERBB2-201ENST00000269571 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
ERBB2-201ENST00000269571 RPUSD2Q8IZ73 545 aaKnown RBP13.52□□□□□ -0.25
ERBB2-201ENST00000269571 TMEM87AQ8NBN3 555 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.52□□□□□ -0.25
ERBB2-201ENST00000269571 WWC3Q9ULE0 1092 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 TMEM94Q12767 1356 aa13.52□□□□□ -0.25
ERBB2-201ENST00000269571 A6NNZ2 444 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 CMA1P23946 247 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 TUBB8Q3ZCM7 444 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 GRAMD1CQ8IYS0 662 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 NSUN7Q8NE18 718 aaKnown RBP13.51□□□□□ -0.25
ERBB2-201ENST00000269571 EYA2O00167 538 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 TSPY3P0CV98 308 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 TSPY8P0CW00 308 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 GCKRQ14397 625 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 PIK3AP1Q6ZUJ8 805 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 CSGALNACT2Q8N6G5 542 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 ANKRD13CQ8N6S4 541 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 FAM71BQ8TC56 605 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 BAIAP2L1Q9UHR4 511 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 RCOR1Q9UKL0 485 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 PLXNC1O60486 1568 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 VIMP08670 466 aaKnown RBP13.51□□□□□ -0.25
ERBB2-201ENST00000269571 CTDSPL2Q05D32 466 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
ERBB2-201ENST00000269571 CCDC155Q8N6L0 562 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 SLC52A2Q9HAB3 445 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-201ENST00000269571 ATP5JP18859 108 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 CDC25BP30305 580 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 PAK1Q13153 545 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 SRGAP1Q7Z6B7 1085 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 SMYD4Q8IYR2 804 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-201ENST00000269571 FBF1Q8TES7 1133 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 NUCKS1Q9H1E3 243 aaKnown RBP13.51□□□□□ -0.25
ERBB2-201ENST00000269571 CDC23Q9UJX2 597 aa13.51□□□□□ -0.25
ERBB2-201ENST00000269571 E7EVH7 732 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 HSPD1P10809 573 aaKnown RBP13.5□□□□□ -0.25
ERBB2-201ENST00000269571 ZAP70P43403 619 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
ERBB2-201ENST00000269571 DTHD1Q6ZMT9 781 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 SELENOOQ9BVL4 669 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 SERPINA10Q9UK55 444 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 CTIFO43310 598 aaKnown RBP13.5□□□□□ -0.25
ERBB2-201ENST00000269571 ANKS4BQ8N8V4 417 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 TMEM110-MUSTN1A8MSY1 372 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 RPSAP08865 295 aaKnown RBP13.5□□□□□ -0.25
ERBB2-201ENST00000269571 CASP14P31944 242 aa13.5□□□□□ -0.25
ERBB2-201ENST00000269571 MAGEA1P43355 309 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms