RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 DNAJC5GQ8N7S2 189 aa17.95■□□□□ 0.46
COPS3-201ENST00000268717 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
COPS3-201ENST00000268717 TOMM22Q9NS69 142 aa17.95■□□□□ 0.46
COPS3-201ENST00000268717 MCM9Q9NXL9 1143 aa17.95■□□□□ 0.46
COPS3-201ENST00000268717 NAP1L2Q9ULW6 460 aaPredicted RBP17.95■□□□□ 0.46
COPS3-201ENST00000268717 CCDC69A6NI79 296 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 CPLX1O14810 134 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 EGFRP00533 1210 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 RHBDL3P58872 404 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 ZNF280AP59817 542 aaPredicted RBP17.94■□□□□ 0.46
COPS3-201ENST00000268717 PPP2R5BQ15173 497 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 TBC1D10BQ4KMP7 808 aaPredicted RBP17.94■□□□□ 0.46
COPS3-201ENST00000268717 RRP12Q5JTH9 1297 aaKnown RBP17.94■□□□□ 0.46
COPS3-201ENST00000268717 HHIPL2Q6UWX4 724 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 SYNE3Q6ZMZ3 975 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 IQCA1Q86XH1 822 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 NCOA5Q9HCD5 579 aaKnown RBP17.94■□□□□ 0.46
COPS3-201ENST00000268717 DAGLAQ9Y4D2 1042 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 SLC12A7Q9Y666 1083 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 MYO3BQ8WXR4 1341 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 SMIM22K7EJ46 135 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 HDLBPQ00341 1268 aaKnown RBP17.94■□□□□ 0.46
COPS3-201ENST00000268717 SEC23AQ15436 765 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 CSPP1Q1MSJ5 1256 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 FOXD4L5Q5VV16 416 aaPredicted RBP17.94■□□□□ 0.46
COPS3-201ENST00000268717 NFXL1Q6ZNB6 911 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 TEX11Q8IYF3 940 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 CERS5Q8N5B7 392 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 FOXD4L4Q8WXT5 416 aaPredicted RBP17.94■□□□□ 0.46
COPS3-201ENST00000268717 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 ZSCAN16Q9H4T2 348 aaPredicted RBP17.94■□□□□ 0.46
COPS3-201ENST00000268717 CREBZFQ9NS37 354 aa17.94■□□□□ 0.46
COPS3-201ENST00000268717 PCNTO95613 3336 aa17.93■□□□□ 0.46
COPS3-201ENST00000268717 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
COPS3-201ENST00000268717 USP17L8P0C7I0 530 aa17.93■□□□□ 0.46
COPS3-201ENST00000268717 GSE1Q14687 1217 aa17.93■□□□□ 0.46
COPS3-201ENST00000268717 KIF4BQ2VIQ3 1234 aa17.93■□□□□ 0.46
COPS3-201ENST00000268717 CDC37L1Q7L3B6 337 aa17.93■□□□□ 0.46
COPS3-201ENST00000268717 ZSCAN10Q96SZ4 725 aaPredicted RBP17.93■□□□□ 0.46
COPS3-201ENST00000268717 ZNF287Q9HBT7 754 aa17.93■□□□□ 0.46
COPS3-201ENST00000268717 TNKSO95271 1327 aa17.92■□□□□ 0.46
COPS3-201ENST00000268717 CCDC178Q5BJE1 867 aa17.92■□□□□ 0.46
COPS3-201ENST00000268717 RBM26Q5T8P6 1007 aaKnown RBP17.92■□□□□ 0.46
COPS3-201ENST00000268717 TGFBRAP1Q8WUH2 860 aa17.92■□□□□ 0.46
COPS3-201ENST00000268717 DDX11Q96FC9 970 aa17.92■□□□□ 0.46
COPS3-201ENST00000268717 DDX60LQ5H9U9 1706 aaKnown RBP17.92■□□□□ 0.46
COPS3-201ENST00000268717 STK36Q9NRP7 1315 aa17.92■□□□□ 0.46
COPS3-201ENST00000268717 CCDC196A0A1B0GTZ2 297 aa17.91■□□□□ 0.46
COPS3-201ENST00000268717 GOLGA8AA7E2F4 631 aa17.91■□□□□ 0.46
COPS3-201ENST00000268717 H3BQV1 296 aa17.91■□□□□ 0.46
COPS3-201ENST00000268717 MBD3O95983 291 aa17.91■□□□□ 0.46
COPS3-201ENST00000268717 FDPSP14324 419 aaKnown RBP17.91■□□□□ 0.46
COPS3-201ENST00000268717 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
COPS3-201ENST00000268717 TTF2Q9UNY4 1162 aaKnown RBP17.91■□□□□ 0.46
COPS3-201ENST00000268717 FLT1P17948 1338 aa17.91■□□□□ 0.46
COPS3-201ENST00000268717 NAV1Q8NEY1 1877 aa17.91■□□□□ 0.46
COPS3-201ENST00000268717 CDK5RAP2Q96SN8 1893 aa17.91■□□□□ 0.46
COPS3-201ENST00000268717 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 RANBP6O60518 1105 aaKnown RBP17.9■□□□□ 0.46
COPS3-201ENST00000268717 MICU3Q86XE3 530 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 TEKT1Q969V4 418 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 KLRG1Q96E93 195 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 SENP2Q9HC62 589 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 MYOZ2Q9NPC6 264 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 DDX49Q9Y6V7 483 aaKnown RBP17.9■□□□□ 0.46
COPS3-201ENST00000268717 TRAF5O00463 557 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 PRPF40AO75400 957 aaKnown RBP17.9■□□□□ 0.46
COPS3-201ENST00000268717 CALM1P0DP23 149 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 CALM2P0DP24 149 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 CALM3P0DP25 149 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 CYP2D6P10635 497 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 EVX2Q03828 476 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 FMR1Q06787 632 aaKnown RBP eCLIP17.9■□□□□ 0.46
COPS3-201ENST00000268717 NTRK3Q16288 839 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 ENAHQ8N8S7 591 aaPredicted RBP17.9■□□□□ 0.46
COPS3-201ENST00000268717 GLIS2Q9BZE0 524 aaPredicted RBP17.9■□□□□ 0.46
COPS3-201ENST00000268717 TAOK2Q9UL54 1235 aa17.9■□□□□ 0.46
COPS3-201ENST00000268717 DDAH1O94760 285 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 IFNAR1P17181 557 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 MMP14P50281 582 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 RESTQ13127 1097 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 MAPKAPK5Q8IW41 473 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 ZNF654Q8IZM8 581 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 OGFOD1Q8N543 542 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 ZDHHC15Q96MV8 337 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 FAM217BQ9NTX9 383 aaPredicted RBP17.89■□□□□ 0.45
COPS3-201ENST00000268717 TCP11L1Q9NUJ3 509 aa17.89■□□□□ 0.45
COPS3-201ENST00000268717 ORC3Q9UBD5 711 aaPredicted RBP17.89■□□□□ 0.45
COPS3-201ENST00000268717 POLR3DP05423 398 aaPredicted RBP17.88■□□□□ 0.45
COPS3-201ENST00000268717 CDC27P30260 824 aa17.88■□□□□ 0.45
COPS3-201ENST00000268717 KRT85P78386 507 aa17.88■□□□□ 0.45
COPS3-201ENST00000268717 IFIT1BQ5T764 474 aaKnown RBP17.88■□□□□ 0.45
COPS3-201ENST00000268717 ATL3Q6DD88 541 aa17.88■□□□□ 0.45
COPS3-201ENST00000268717 C16orf86Q6ZW13 317 aa17.88■□□□□ 0.45
COPS3-201ENST00000268717 ANKS1AQ92625 1134 aa17.88■□□□□ 0.45
COPS3-201ENST00000268717 ELP1O95163 1332 aa17.88■□□□□ 0.45
COPS3-201ENST00000268717 PRDM1O75626 825 aa17.87■□□□□ 0.45
COPS3-201ENST00000268717 ADD1P35611 737 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms