RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CCDC196A0A1B0GTZ2 297 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 H3BQV1 296 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 RESTQ13127 1097 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 IFFO2Q5TF58 517 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 TTC6Q86TZ1 520 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 DGKHQ86XP1 1220 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 CCDC144CPQ8IYA2 1237 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 ZNF444Q8N0Y2 327 aaPredicted RBP19.1■□□□□ 0.65
TPM1-201ENST00000267996 IDI2Q9BXS1 227 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 TAOK3Q9H2K8 898 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 IL17RBQ9NRM6 502 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 PCDHAC2Q9Y5I4 1007 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 NFKBIEO00221 500 aa19.09■□□□□ 0.65
TPM1-201ENST00000267996 PSMD14O00487 310 aa19.09■□□□□ 0.65
TPM1-201ENST00000267996 NMT2O60551 498 aa19.09■□□□□ 0.65
TPM1-201ENST00000267996 PRPF40AO75400 957 aaKnown RBP19.09■□□□□ 0.65
TPM1-201ENST00000267996 DDAH1O94760 285 aa19.09■□□□□ 0.65
TPM1-201ENST00000267996 TROAPQ12815 778 aa19.09■□□□□ 0.65
TPM1-201ENST00000267996 PICALMQ13492 652 aa19.09■□□□□ 0.65
TPM1-201ENST00000267996 CATIPQ7Z7H3 387 aa19.09■□□□□ 0.65
TPM1-201ENST00000267996 NIM1KQ8IY84 436 aa19.09■□□□□ 0.65
TPM1-201ENST00000267996 ZSCAN16Q9H4T2 348 aaPredicted RBP19.09■□□□□ 0.65
TPM1-201ENST00000267996 PPP1R1BQ9UD71 204 aaPredicted RBP19.09■□□□□ 0.65
TPM1-201ENST00000267996 PPFIA3O75145 1194 aa19.08■□□□□ 0.65
TPM1-201ENST00000267996 RAD17O75943 681 aa19.08■□□□□ 0.65
TPM1-201ENST00000267996 CALM1P0DP23 149 aa19.08■□□□□ 0.65
TPM1-201ENST00000267996 CALM2P0DP24 149 aa19.08■□□□□ 0.65
TPM1-201ENST00000267996 CALM3P0DP25 149 aa19.08■□□□□ 0.65
TPM1-201ENST00000267996 NFIAQ12857 509 aa19.08■□□□□ 0.65
TPM1-201ENST00000267996 FERMT3Q86UX7 667 aa19.08■□□□□ 0.65
TPM1-201ENST00000267996 LTBP3Q9NS15 1303 aa19.08■□□□□ 0.65
TPM1-201ENST00000267996 FMNL1O95466 1100 aaPredicted RBP19.08■□□□□ 0.64
TPM1-201ENST00000267996 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.64
TPM1-201ENST00000267996 CFAP100Q494V2 611 aa19.08■□□□□ 0.64
TPM1-201ENST00000267996 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.64
TPM1-201ENST00000267996 FBXO18Q8NFZ0 1043 aa19.08■□□□□ 0.64
TPM1-201ENST00000267996 NEDD1Q8NHV4 660 aa19.08■□□□□ 0.64
TPM1-201ENST00000267996 TSPY3P0CV98 308 aa19.07■□□□□ 0.64
TPM1-201ENST00000267996 TSPY8P0CW00 308 aa19.07■□□□□ 0.64
TPM1-201ENST00000267996 DNM1Q05193 864 aaKnown RBP19.07■□□□□ 0.64
TPM1-201ENST00000267996 KLHL40Q2TBA0 621 aa19.07■□□□□ 0.64
TPM1-201ENST00000267996 NBPF11Q86T75 865 aa19.07■□□□□ 0.64
TPM1-201ENST00000267996 C8orf76Q96K31 380 aa19.07■□□□□ 0.64
TPM1-201ENST00000267996 CNPY2Q9Y2B0 182 aa19.07■□□□□ 0.64
TPM1-201ENST00000267996 NOVP48745 357 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 RBM5P52756 815 aaKnown RBP eCLIP19.06■□□□□ 0.64
TPM1-201ENST00000267996 CRACR2BQ8N4Y2 399 aaPredicted RBP19.06■□□□□ 0.64
TPM1-201ENST00000267996 AGBL3Q8NEM8 1001 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 NUP133Q8WUM0 1156 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 PHKBQ93100 1093 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 EHD4Q9H223 541 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 RBM28Q9NW13 759 aaKnown RBP19.06■□□□□ 0.64
TPM1-201ENST00000267996 FAM198AQ9UFP1 575 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 SWAP70Q9UH65 585 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 TAOK2Q9UL54 1235 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 PLIN4Q96Q06 1357 aa19.06■□□□□ 0.64
TPM1-201ENST00000267996 CXCL9Q07325 125 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 SSRP1Q08945 709 aaKnown RBP19.05■□□□□ 0.64
TPM1-201ENST00000267996 FUT2Q10981 343 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 USP48Q86UV5 1035 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 MAP3K14Q99558 947 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 SERPINB13Q9UIV8 391 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 BCS1LQ9Y276 419 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 ARFGEF1Q9Y6D6 1849 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 GOLGB1Q14789 3259 aaKnown RBP19.05■□□□□ 0.64
TPM1-201ENST00000267996 ZFPM1Q8IX07 1006 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 KLHL34Q8N239 644 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 PRMT6Q96LA8 375 aaPredicted RBP19.05■□□□□ 0.64
TPM1-201ENST00000267996 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 DHX36Q9H2U1 1008 aaKnown RBP19.05■□□□□ 0.64
TPM1-201ENST00000267996 GDPD2Q9HCC8 539 aa19.05■□□□□ 0.64
TPM1-201ENST00000267996 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
TPM1-201ENST00000267996 ENTPD3O75355 529 aa19.04■□□□□ 0.64
TPM1-201ENST00000267996 HLA-DOAP06340 250 aa19.04■□□□□ 0.64
TPM1-201ENST00000267996 FOSBP53539 338 aa19.04■□□□□ 0.64
TPM1-201ENST00000267996 KRT85P78386 507 aa19.04■□□□□ 0.64
TPM1-201ENST00000267996 FAM173BQ6P4H8 233 aa19.04■□□□□ 0.64
TPM1-201ENST00000267996 MTMR14Q8NCE2 650 aa19.04■□□□□ 0.64
TPM1-201ENST00000267996 SLC26A6Q9BXS9 759 aa19.04■□□□□ 0.64
TPM1-201ENST00000267996 HDAC9Q9UKV0 1011 aa19.04■□□□□ 0.64
TPM1-201ENST00000267996 COL2A1P02458 1487 aaPredicted RBP19.04■□□□□ 0.64
TPM1-201ENST00000267996 SPDYE2BA6NHP3 402 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 SPDYE6P0CI01 402 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 GUCY1B3Q02153 619 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 CSPP1Q1MSJ5 1256 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 TRIM22Q8IYM9 498 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 NLGN2Q8NFZ4 835 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 GPT2Q8TD30 523 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 WASF1Q92558 559 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 AIFM3Q96NN9 605 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.03■□□□□ 0.64
TPM1-201ENST00000267996 RNF26Q9BY78 433 aaPredicted RBP19.03■□□□□ 0.64
TPM1-201ENST00000267996 TDRD3Q9H7E2 651 aaKnown RBP19.03■□□□□ 0.64
TPM1-201ENST00000267996 KAT14Q9H8E8 782 aa19.03■□□□□ 0.64
TPM1-201ENST00000267996 SIPA1L1O43166 1804 aa19.02■□□□□ 0.64
TPM1-201ENST00000267996 SHMT1P34896 483 aa19.02■□□□□ 0.64
TPM1-201ENST00000267996 CACNB3P54284 484 aa19.02■□□□□ 0.64
TPM1-201ENST00000267996 ATRNL1Q5VV63 1379 aa19.02■□□□□ 0.64
TPM1-201ENST00000267996 OTUD7BQ6GQQ9 843 aa19.02■□□□□ 0.64
TPM1-201ENST00000267996 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms